Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01638 ATGAAAGGGAGCGGTTTGTACTCAGCGTTTCCTGCAAGACGTGGGAAGATCCCAATTCCCGTCCCAAGTCTCCTCTCTGAAAATGGAAGATCACATTTAGAAGATAAGAAAGCTGTAAAGAAGGAGAATATCACAACAAAATCTGCAATTGCAAATGCCACTAAATTTATGGTATGGCAGGAACAGCATCAGAGAGTAGAGATCATTCACAATGACCAAGGCAACAACACCACTCCTTCTTGTGTTGCTTTCACAGACCATGAAAGGTTGATAGGAGATGCTGCTAAAAATCAGGCTGCTACCAATCTAGAGAACACCATCTTCGATGCGAAGAGGTTAATCGGTAGGAAATTCAGTGACACAATTATTCAGAAGGATAAATTGTTGTGGCCATTTAAGGTTGTTGCCGGGGCTAATGACAATCCTATGATTTGTGTCAAGTATAAGGGGCAGGAGAAGCACCTTTGTGCGGAGGAAGTATCATCCATGGTCCTTACAAAGATGCGGGACATTGCAGAGGCATACCTGGAAAAACCTGTAAAGAATGCAGTGGTTACTGTGCCTGCTCATTTCAATGATTCTCAGCGCAAAGCCACCATTGATGCTGGTGCTATTATCGGCCTCAAAGTTATTCGAATAATGAACGAACCCACCGCCGCAGCAATTGCATATGGCCTTGATAAGAGAAATGATTGTGTTGGAGAGCGAAATATTTTTATCTTTGATTTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAGCACAAGGTCTTCCAAGTCAAGGCTACAGCAGGAAACACTCATCTTGGTGGAGAGGACATTGATAACAGAATGGTGAACTACTTTGTGGAGGAAATGAAAAGAAAAAATAAAATGGACGTAAGTGGGAACCCGAGAGCCCTGAGAAGGTTGAGAAGGGCATGCGAGAGAGCAAAAAGGACACTCTCATATGCCGTTACTGCAACCATTGAGGTAGATGCTTTATTTCAGGGAATTGACTTGTGTTCTTCAATCAGTCGAGCAAAGTTTGAAGAAATCAGTATGGATCTTTTTGAAGAGTGTTTGGAGACAGTGGAAAGGTGTCTCACTGACTCTAAGATGGATAAGAGCAGTGTAGACGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATACCCAAAGTGCAACAACTATTGCAGGACTTTTTCCAGGGAAAGAATCTTTGCAAGAGCATTAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATATCCCGGATTTGGTATTGAAGGATGTTACACCGCTTTCACTTGGTATATCAACAAAAGCAGATATCATGAGTGTTGTGATTCCTAGAAACACTACCATTCCTGTAATGAAGAAACAAGGATATGAGACAACCACAGATAACCAAACATCTGTCCTGATTAATGTTTATGAGGGCGAGAGAGCAAGGGCCAGTGACAATAATTTGCTGGGCTTTTTTCAACTTTCTGGTTTTCCTCTTGTTCCCCGTGGGCATCCTTTGAAAGTGACCTTTTCCATAGATGAAAATGGCATACTTTCTGTTTCTGCTGAGGAAGAAACAACCGGTAATAGGAATGAAATTACTATAAGGAACGATATAGGAAGACTGTCAGCTGCGCAAATTAGTATTATGATGCAAGAAGCTGAGAATTACAAGTCTGAAGATAACAAGTTTCTTAGGAAGGCCAATGCAATTAATGATTTGGATTCTTATGTATACAAGGTCAAAAACGCTTTAAAGAGAGAAGATATCAGCTCAAAGTTTAGCTCGGAAGAAGAGAAAGATATAAGCTGTTCAATTGCTAGAGCCATTGATATGGTTGATGGTGTGAACAAGAATGAAGATACAGTTGGTTTGGAAGAGTGTGTGAATGAGCTTAAAGCAATCTTTGAATGGATTGGGGTCATGGGCAAGGATACTTAG 1968 0.4141 MKGSGLYSAFPARRGKIPIPVPSLLSENGRSHLEDKKAVKKENITTKSAIANATKFMVWQEQHQRVEIIHNDQGNNTTPSCVAFTDHERLIGDAAKNQAATNLENTIFDAKRLIGRKFSDTIIQKDKLLWPFKVVAGANDNPMICVKYKGQEKHLCAEEVSSMVLTKMRDIAEAYLEKPVKNAVVTVPAHFNDSQRKATIDAGAIIGLKVIRIMNEPTAAAIAYGLDKRNDCVGERNIFIFDFGGGTFDVSLLTIKHKVFQVKATAGNTHLGGEDIDNRMVNYFVEEMKRKNKMDVSGNPRALRRLRRACERAKRTLSYAVTATIEVDALFQGIDLCSSISRAKFEEISMDLFEECLETVERCLTDSKMDKSSVDDVVLVGGSSRIPKVQQLLQDFFQGKNLCKSINPDEAVAYGAAVQAALLSEGIKNIPDLVLKDVTPLSLGISTKADIMSVVIPRNTTIPVMKKQGYETTTDNQTSVLINVYEGERARASDNNLLGFFQLSGFPLVPRGHPLKVTFSIDENGILSVSAEEETTGNRNEITIRNDIGRLSAAQISIMMQEAENYKSEDNKFLRKANAINDLDSYVYKVKNALKREDISSKFSSEEEKDISCSIARAIDMVDGVNKNEDTVGLEECVNELKAIFEWIGVMGKDT 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01638 655 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 420 549 IPR029047 -
Spst1g01638 655 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 579 644 IPR029048 -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 246 256 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 95 103 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 183 203 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 406 426 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 73 85 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 512 528 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 374 390 - -
Spst1g01638 655 PRINTS 70kDa heat shock protein signature 432 451 - -
Spst1g01638 655 Gene3D - 108 163 - -
Spst1g01638 655 ProSitePatterns Heat shock hsp70 proteins family signature 2. 240 253 IPR018181 -
Spst1g01638 655 Gene3D - 229 403 - -
Spst1g01638 655 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 429 584 IPR029047 -
Spst1g01638 655 Pfam Hsp70 protein 62 642 IPR013126 GO:0005524|GO:0140662
Spst1g01638 655 Gene3D - 56 419 - -
Spst1g01638 655 FunFam Heat shock 70 kDa 272 355 - -
Spst1g01638 655 FunFam Heat shock 70 kDa protein 427 580 - -
Spst1g01638 655 FunFam heat shock 70 kDa protein-like 108 163 - -
Spst1g01638 655 Gene3D - 551 651 IPR029048 -
Spst1g01638 655 SUPERFAMILY Actin-like ATPase domain 235 424 IPR043129 -
Spst1g01638 655 Gene3D Actin; Chain A, domain 4 272 355 - -
Spst1g01638 655 ProSitePatterns Heat shock hsp70 proteins family signature 3. 377 391 IPR018181 -
Spst1g01638 655 PANTHER HEAT SHOCK PROTEIN 70KDA 45 611 IPR013126 GO:0005524|GO:0140662
Spst1g01638 655 SUPERFAMILY Actin-like ATPase domain 58 228 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01638 Spst-Chr1 20316517 20321090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01638 58 644 Calmodulin-binding Proteins AT3G12580 65.365 0.0 782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01638 1 20316517 20321090 Spst1g01638 1 20316517 20321090 ECH