Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01617 ATGAGTGCATTTGAGGTCTTAAACTGGTGGTCCCTTAACAACACTGAGTCTTTCATAGCTGAAGTGTACTACTCAGAAAACATTGGCAGAGTAATCCGTGACATTGGCAATAATGTGAATGCTAGGCGTGACATCAACAATAATGATGAAACCAGCATTGAAAGAAATGTGAACATCATTCCATATTCCATTTACTTTTTTCGTGATCTTGAACAACCCAGCACAGGTCAGACTATGCAACAGACACTTCAATCTGTCTATGATCTCTATCTCACTAATGGTTTGGAGCTAGAAACCATGTCTCTTAGAAAGAAAAATGTAACAAAAGGAAGTTGCATTATGATATTTAGGACACTTTTCCTATTTCTGGTTTTTATGGTGACAAATTCAATAGCTCTTGCGGATCAACAGACATACATAGTTCACATTGACAAGACCAAGATCAAAGCCTCGATTGATTCCCAAGACAGCTCAAAACCATGGTTTGAGTCCATCATTGATTTCATTTCTGAAGCTTCAACGCAAGAAGAAGGAGAAGAAGAGATTTTAGCCCCTCAACTCCTTTATGCCTATGAAACCAGCATGTTTGGTTTTGCTGCCTATCTTTCCAAGAAACACCTCAAATACTTGAACCAAGTTGAGGGTTTCCTCTCAGCCATTCCCGATGAGCTATCAAGCCTCCACACAACATACACCCCGCACTTTCTTGGCCTAAGGAGTGGAAGAACACCGTGGACTGCTTCTAACCTGGCCACTGATGTGATCATTGGGGTTCTTGATTCAGGAATATGGCCTGAACACACCAGTTTCCAAGACTCAGGCTTGTCCCCAGTCCCTTCTCATTGGAAAGGTGTTTGTGAGGAAGGCACCAAGTTCTCTTCCTCAAATTGCAACAAGAAGCTTATTGGTGCAAGAGCCTATTTCAAGGGGTATGAAAAATATTTTGGAAAAAGAATCAATGAAACAGTGGATTACCTTTCTCCAAGAGATTCCCAAGGGCATGGAACGCACACTGCCTCAACTGCAGCTGGTAATGTGGTGAAAAATGCCAACCTTTTTGGCCAGGCTAGAGGTACAGCAACCGGAATGAGGTATACTTCTAGAATTGCAGCTTATAAAGTATGCTGGTCTTCTGGTTGTACTAATTCTGATGTATTAGCGGCTATGGACCAAGCAGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGGACTATTCCCAAACCTTTTTATAGTGATAGTATTGCCATAGCTTCATTTGGGGCAACCAAGAAAGGAGTTTTGGTTGCTTGCTCCGCAGGAAATTCAGGCCCCTTTCCATCAACAGTTGGAAATGGTGCCCCATGGATCATGACAGTTGCTGCTAGCTCCACCGACCGAACCTTTCCAACAAAAGTAAAGCTTGGGAATGGGCAAATTTTCAAAGGGTCATCTTTATATCAAGGTAAGAAGACAAACCAATTGCCCCTTGTATATGGAAAATCAGCTGGTACAACAAAGGAAGCACAGTATTGCATTGGAGGCTCCCTTGATCCAAAGCTTGTGCATGGGAAAATAGTTGCTTGTGAAAGAGGAATAAATGGTAGAACTGAGAAAGGAGAGGAAGTGAAAGTGGCAGGTGGGGCAGGAATGATACTACTCAACAATGAATATCAAGGAGAAGAGCTTTTTGCTGACCCTCATATTTTGTCGGCCACATCCTTGGGGGCTTCAGCAAGTAATATTGTTAGAAGCTACAGTCAATCTCTTAAGAAACCAACAGCTTCAATTTCCTTCATGGGGACAAGGTTTGGGGACCCTGCACCAGTGATGGCAGCATTTTCTTCTAGAGGACCAAGTTTAGTGGGACTAGATGTGATTAAGCCTGATGTGACTGCACCTGGTGTGAACATCTTGGCCGCTTGGCCATCCAAAATTAGCCCAAGCTTTCTCACGAGTGACAAAAGAAAGGTATTATTTAACATACTTTCAGGTACTTCAATGTCTTGTCCTCATGTTAGTGGCATAGCAGCACTGCTCAAGTCTTTGCACAAAGGTTGGTCTCCAGCAGCCATTAAATCTGCTCTGATGACTACCGCTTACACATTGAACAACAAAGGAGATCCAATTTCAGACATGGCCTCCAACAAATCACTTTTGGCTACCCCTTTTGTATTTGGTTCAGGCCATGTTAATCCTATAAGTGCTTCTGATCCAGGGTTAGTATATGACATCAGCACCAAAGACTACTTCAATTATTTTTGTAGCATAAACTTTACTTCTTCCCAGATTGCTTTACTATCAAGAAGTAAATTTGTATGTTCTAAAAAAGCAGCTCTTCAAGCTGGTGATTTGAACTACCCTTCATTTGCTGTTCTATTTGGCAGAAGTGCCTTTAATGCTAGTGTGACATACAGGAGGGTTGTCACAAATGTTGGAAAATCCCAAAGTTCTTATGCAGTTAAAGTGGAACAACCGAATGGAGTTTCAGTTACTGTTGAACCAATGAAATTGAAGTTTGAAAAACTGAGTCAGAAATTGAGCTACAATGTGACATTTTTGACAATTGGAGGAGCAAAAGTTGCTGGTACCTCATCATTTGGGTCACTAGTTTGGGTATCTGACAGATACAAAGTTAGAAGTCCTATAGCAGTGACCTGGCAGTAG 2649 0.4183 MSAFEVLNWWSLNNTESFIAEVYYSENIGRVIRDIGNNVNARRDINNNDETSIERNVNIIPYSIYFFRDLEQPSTGQTMQQTLQSVYDLYLTNGLELETMSLRKKNVTKGSCIMIFRTLFLFLVFMVTNSIALADQQTYIVHIDKTKIKASIDSQDSSKPWFESIIDFISEASTQEEGEEEILAPQLLYAYETSMFGFAAYLSKKHLKYLNQVEGFLSAIPDELSSLHTTYTPHFLGLRSGRTPWTASNLATDVIIGVLDSGIWPEHTSFQDSGLSPVPSHWKGVCEEGTKFSSSNCNKKLIGARAYFKGYEKYFGKRINETVDYLSPRDSQGHGTHTASTAAGNVVKNANLFGQARGTATGMRYTSRIAAYKVCWSSGCTNSDVLAAMDQAVSDGVDVLSLSLGTIPKPFYSDSIAIASFGATKKGVLVACSAGNSGPFPSTVGNGAPWIMTVAASSTDRTFPTKVKLGNGQIFKGSSLYQGKKTNQLPLVYGKSAGTTKEAQYCIGGSLDPKLVHGKIVACERGINGRTEKGEEVKVAGGAGMILLNNEYQGEELFADPHILSATSLGASASNIVRSYSQSLKKPTASISFMGTRFGDPAPVMAAFSSRGPSLVGLDVIKPDVTAPGVNILAAWPSKISPSFLTSDKRKVLFNILSGTSMSCPHVSGIAALLKSLHKGWSPAAIKSALMTTAYTLNNKGDPISDMASNKSLLATPFVFGSGHVNPISASDPGLVYDISTKDYFNYFCSINFTSSQIALLSRSKFVCSKKAALQAGDLNYPSFAVLFGRSAFNASVTYRRVVTNVGKSQSSYAVKVEQPNGVSVTVEPMKLKFEKLSQKLSYNVTFLTIGGAKVAGTSSFGSLVWVSDRYKVRSPIAVTWQ 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01617 882 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 139 879 IPR045051 -
Spst1g01617 882 FunFam Subtilisin-like protease SBT1.5 748 882 - -
Spst1g01617 882 FunFam Subtilisin-like protease SBT1.5 253 471 - -
Spst1g01617 882 Pfam Fibronectin type-III domain 778 879 IPR041469 -
Spst1g01617 882 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 126 228 IPR037045 -
Spst1g01617 882 Gene3D - 460 598 - -
Spst1g01617 882 Pfam PA domain 490 556 IPR003137 -
Spst1g01617 882 Gene3D Peptidase S8/S53 domain 253 744 IPR036852 GO:0004252|GO:0006508
Spst1g01617 882 Pfam Subtilase family 253 705 IPR000209 GO:0006508|GO:0008236
Spst1g01617 882 Gene3D - 748 881 - -
Spst1g01617 882 ProSiteProfiles Serine proteases, subtilase domain profile. 230 731 - -
Spst1g01617 882 PRINTS Subtilisin serine protease family (S8) signature 251 270 IPR015500 -
Spst1g01617 882 PRINTS Subtilisin serine protease family (S8) signature 658 674 IPR015500 -
Spst1g01617 882 PRINTS Subtilisin serine protease family (S8) signature 330 343 IPR015500 -
Spst1g01617 882 ProSitePatterns Serine proteases, subtilase family, serine active site. 659 669 IPR023828 -
Spst1g01617 882 FunFam subtilisin-like protease SBT1.5 460 598 - -
Spst1g01617 882 CDD PA_subtilisin_like 467 591 - -
Spst1g01617 882 SUPERFAMILY Subtilisin-like 227 735 IPR036852 GO:0004252|GO:0006508
Spst1g01617 882 CDD Peptidases_S8_3 227 695 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01617 Spst-Chr1 20020886 20025038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01617 136 882 Subtilisin-like Serine Gene Family AT1G01900 54.473 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01617 - - gmx:100790006 1375.92