Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01615 ATGTTTACTTTATTCCAGGATGGTGTCATGGCAACTCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCGGTACAAGTGCTTCTTTGTCCTCGCAGTGGTAAACGACATAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACACATCATCAGAAAACTGTTATTGTGGATGCTGATGCTGGAACTAATAGAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATGTTCCCCACCACCCTCTTTTTAGAACATTGAGTACAACACATAAGGATGACTACCACAACCCTACTTTCACGGGTCATGTTGGTGGTTGTCCGCGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTGAAAGCTTCAAAACCTCACGGGATTAAAAAGTTGAAAATTTCATACGATGATGCTTTGCTAAGGTTGGAAAGAATTCCAGATTTTATTGGCATCAATGATGCTCCAAATATTGGTGAAGATGATCCTGAAGTTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCTGTCAAGGGGTTTCCAAAGGATCCAAAAAATGCAACAAGCAAGAACCTAGTATGCGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATATTAAGGCCATCCGTGCTGCACAACATTACATTTATATCGAGAATCAATATTTTATCGGCTCTTCATACAATTGGAGTCAACATAAAGACCTTGGAAAATTAGTTAGCCAATTGTAA 816 0.3922 MFTLFQDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGTNRRKIVAFVGGLDLCDGRYDVPHHPLFRTLSTTHKDDYHNPTFTGHVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDFIGINDAPNIGEDDPEVWHVQIFRSIDSNSVKGFPKDPKNATSKNLVCGKNVLIDMSIHTAYIKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGKLVSQL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01615 271 Gene3D Endonuclease Chain A 5 162 - -
Spst1g01615 271 SUPERFAMILY Phospholipase D/nuclease 211 259 - -
Spst1g01615 271 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 48 83 IPR001736 GO:0003824
Spst1g01615 271 Pfam Phospholipase D Active site motif 49 83 IPR001736 GO:0003824
Spst1g01615 271 SUPERFAMILY Phospholipase D/nuclease 9 148 - -
Spst1g01615 271 PANTHER PHOSPHOLIPASE D 6 268 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01615 Spst-Chr1 20014128 20016259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01615 7 265 Phospholipase D Gene Family (Wang group) AT2G42010 85.385 2.31e-165 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01615 K01115 - gmx:100791059 530.791