Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01613 ATGGAAATTGCTCTAAAGATTACTGAAAAGATAAAAGCAAATGAAAGATTTGCAGTGTATGTTGTTATTCCCATGTGGCCAGAAGGAGTTCCGACAGGGGCTGCCACGCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACCATTTCCAAGGCTTTGGTTGAAGCTGGGCTTGAAGCAGCATTTTCTCCACAAGATTATTTGAACTTTTTTTGTCTTGGTAATCGAGAGGTCATCAATTTGTATGATAATGTTGGTGTGACTGGAGTTCCTCCCCCAGCAAATAGTCCTCAACTGGCTAGCCGAAATAGCCAACGTTTCATGATTTACGTTCATTCCAAAGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAATATCAACCAGCGCTCCATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCCTATCAACCTCATCATACATGGGCAAAAGCACAATCTTATCCACACGGACAAATCCATGGATATAGGATGTCACTTTGGGCAGAACATACGGGAACGCTTGAGGACTGCTTCTTGCAACCTGAGAGTCTTGAATGTGTAAGAAGGATTAGAGCAATGGGGGAAATGAACTGGAATCAGTTTTCAGCAAATGAAAAAACAGAGATGAAAGGGCATCTACTGAAATATCCTGTAGATGTTGATAGAAAGGGCAAGGTTAGACCCCTTCCGGACCAGGAAGAGTTCCCAGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCCATGAAAGAGAATCTAACTATTTGA 801 0.417 MEIALKITEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETISKALVEAGLEAAFSPQDYLNFFCLGNREVINLYDNVGVTGVPPPANSPQLASRNSQRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHHTWAKAQSYPHGQIHGYRMSLWAEHTGTLEDCFLQPESLECVRRIRAMGEMNWNQFSANEKTEMKGHLLKYPVDVDRKGKVRPLPDQEEFPDVGGKIVGSFLAMKENLTI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01613 266 Gene3D Endonuclease Chain A 2 167 - -
Spst1g01613 266 SMART pld_4 112 139 IPR001736 GO:0003824
Spst1g01613 266 PANTHER PHOSPHOLIPASE D 1 257 IPR015679 -
Spst1g01613 266 SUPERFAMILY Phospholipase D/nuclease 3 198 - -
Spst1g01613 266 Pfam Phospholipase D C terminal 186 256 IPR024632 -
Spst1g01613 266 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 112 139 IPR001736 GO:0003824
Spst1g01613 266 Pfam Phospholipase D Active site motif 113 139 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01613 Spst-Chr1 19996204 19998230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01613 1 266 Phospholipase D Gene Family (Wang group) AT2G42010 70.447 1.10e-145 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01613 K01115 - gmx:100791059 512.301