Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01600 ATGCTAAGCTGTGAAATTTTGCAGTCTTATCAGCATAAAAGCTTTTGGATGCCACGGGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGACAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATATTCAGCAACAAGAAACAAGCAGTTGAAGATGTTAGTGGTAGGCCAATTTCAGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTCTGTCACGGGTCAATTTTCTGACCGTCTTTTTGGATCTGATCTTGCTAGAACTGTGAATTTGGTTGATAAGAACGTGCCATCTATTGTGAGTGGAAATATGAACATGGGAAGGAAGGATTTTGAGCATCAATATGGTAATGATCCTTCTGTGGGATTGTCAATATCTCATTCCATTGCAGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAATTGCATGCCTGCTTCATCCATGGGCCACTCCTATAGCAGGGAAGATAATAGTACAATTTCAGTAGGTGATGGCTACAATAAGAATGATGGCAATATTTCGTTGGGTCCTACTTATGACAATAGAAATGACAACACCATTGGCATGGGGACCAGAATAAGTAGTAAGACTGATGACAATCTTCTTTCAGTGGCTCATACCTTCAATAAAGGGGATGGGGGTTTTATGCTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGCAAGTTTCATATCAATGGGTCAATCATATGAGAAAGATGATGGCAATTTAATATCTCTGGGCACCTCATATTCCAAGGGGCATGAGAGCTTTATATCAATTGGTCCAACATATGGTAAATCTGGAGAAAATTTCATTACCGTCGCTCCTTATGACAAGGGTACTGATCATCTAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTTCATCATATGACAGAGGAGATTCTAGCTCTTTACCTGTGGGCCAAAATCACCATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGACGACCCTGAAGCAAATCCCTCTGGTGGAATCATCAGTGGCTATGATCTGTTGATAGGAAGCCAGAACTCAGCTCAAGGTTTGGATAGTCAGAACGATCTGACTGAATCAAACACTGAATCACTTATAAATAGCATTCCAAAACCCAATACTAAAAATGATATTGTCGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCAACTAACAACTTCCCTTCAAATGTCAAAAGTTTACTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCTCGGGAGAAAAGTCTTAAAGGAATCATCAAAGGAACTGGGTATTTGTGTTCATGTGATGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCTAATAATCACATATACTTTGAGAATGGAAAAACCATCTATGCGGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTAGGGAGCTTCAACGTATCTATGGAAAGGATGAAGTGATAATTCCGTCTTGA 1773 0.4016 MLSCEILQSYQHKSFWMPRDAGCMAEENVGYDNSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEDVSGRPISGVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDLARTVNLVDKNVPSIVSGNMNMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPASSMGHSYSREDNSTISVGDGYNKNDGNISLGPTYDNRNDNTIGMGTRISSKTDDNLLSVAHTFNKGDGGFMLMGHNYGKGDESILSMGQPFDKGDASFISMGQSYEKDDGNLISLGTSYSKGHESFISIGPTYGKSGENFITVAPYDKGTDHLISMGPTYDKVDSNIASTVSSYDRGDSSSLPVGQNHHKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGSQNSAQGLDSQNDLTESNTESLINSIPKPNTKNDIVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVIIPS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01600 590 PANTHER AUTOIMMUNE REGULATOR 15 530 - -
Spst1g01600 590 MobiDBLite consensus disorder prediction 347 383 - -
Spst1g01600 590 MobiDBLite consensus disorder prediction 347 375 - -
Spst1g01600 590 MobiDBLite consensus disorder prediction 173 196 - -
Spst1g01600 590 Pfam Tify domain binding domain 483 538 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01600 Spst-Chr1 19905191 19907274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01600 445 571 PHD Transcription Factor Family AT3G53680 55.906 1.02e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01600 - - gmx:100782217 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01600 1 19905191 19907274 Spst1g01600 1 19905191 19907274 ECH
Spst7g00740 7 7621127 7627176 Spst1g01600 1 19905191 19907274 ECH