Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01588 ATGGAGATAACCTACGCATCGCCAAGTTTCTCCGACCTCTCCGCCGTCGCCGCCGCCGCAGCTACCTCCACCATGCCTTCCTCCGCCACCGCCCCTCGTCCCCTCAGGATCATTCCTCTCCAGCACCCCACCGCCACCTCTTCCTCCTCGCCGCCGCCCAACGTCGCCTTCGCGCGCTGGACCGCCGGGCTCCGGCGGATGACGTGGCTCCAGTGGCTCGAGTTCTTCCTCCCTTGCATCCGCTGGATTCGCATCTACAAATGGCGCGAGTATTTCCAGGTTGATCTCATGGCCGGAATCACCGTCGGTGTCATGCTCGTTCCTCAGTCGATGTCGTATGCTAAATTGGCTGGACTTCAACCGATATATGGACTCTGTAAGATTGCTGAACTGAGCGTGCTCTGGATGAGTTTTGTGATTTGTGAAGACTCTGGTTTTGTGCCGCTATTTGTGTATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTAGGCCCAGTGGCATTGGTTTCTCTCTTGGTAAGTAACGTGCTAAGTGGCATAGCTGATTCCTCCAGTGAATTATACACAGAGCTGGCAATATTACTGTCCCTTATGGTTGGGATATTGGAGTGTGTAATGGGACTCTTGAGGCTTGGATGGCTTATTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTGCTTCAGCTATTGTCATTGGTTTATCTCAAGCAAAGTACTTCTTGGGGTATGATTTAGACAAAAGTAGCAAGATCATCCCAGTAGTTAAGAGTATAATAGATGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCCAGTATGCTTGCGATACTACTCGTCATGAAACACCTGGGAAAATCAAGAAAGTACTTGCGATTCTTGAGAGCAGCAGGTCCTCTTACAGCTGTAGTTCTGGGAACAATTTTTGCAAAAGTTTTTCATCCACCATCAATTTCTTTGGCTGCAAAAGGAATAGATGAGGATGTGGTGGGAGAAATACCTCAGGGCCTACCAAAATTTTCTGTCCCAAAAGCTTTTGAGTATGCACAGTCTTTAATTCCTACTGCTATTCTCATAACTGGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTATGAATTGGATTCAAATCAAGAGTTGTTTGGTCTTGGCGTTTCCAATGTTCTTGGTTCATTTTTTTCAGCATACCCTACTACAGGATCCTTTTCAAGATCAGCTGTAAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGGGATTGTTTCGGGAATTATAATGGTCTGCGCACTTATGTTTCTTACACCATTATTTGAGTACATACCTCAGTGTACCCTTGCTGCTATTGTGATCTCAGCTGTGATAGGTCTGATAGACTATGATGAGGCCATTTTTTTGTGGCGTGTTGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGTACTACAACATTGTTCCTTGGTATTGAGATTGGTGTCCTTGTTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTAGGTCGTTTGCCAGGAACAACTGTTTATAGGAATGTCAAACAGTATCCTGAAGCATATACATATAATGGTATTGTAATCGTTCGTGTTGATGCTCCAATTTATTTTGCAAACACGAGTTACATAAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATAGTTCTAAAAGCCGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTCTTGAGATGGCACCTGTGACCTATATAGATTCCAGTGCTGTTCAAGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACGTTCAGATTGCAATATCCAATCCAAGCCCAGAAGTTCTGCTCACCTTGTCAAAATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTCGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAGCGGGATTTAACAGTTCCCACACATCACTCTCTTCATTAGAAGACAAACCAAGTTTATTAGGGCGATTGTCGAAAGAGAGAGCGGAGAACCTTTCAACCGACTTAGAGGCTGGTAATGGCAGACCTCCACTCCCAAGGGACAGAGATTCCCAGTTGGAGCCACTGTTGTCGAATGAACGATGA 2202 0.4491 MEITYASPSFSDLSAVAAAAATSTMPSSATAPRPLRIIPLQHPTATSSSSPPPNVAFARWTAGLRRMTWLQWLEFFLPCIRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLCKIAELSVLWMSFVICEDSGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLSGIADSSSELYTELAILLSLMVGILECVMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDLDKSSKIIPVVKSIIDGADKFSWPPFVMGSSMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTIFAKVFHPPSISLAAKGIDEDVVGEIPQGLPKFSVPKAFEYAQSLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIMVCALMFLTPLFEYIPQCTLAAIVISAVIGLIDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREYEVDVDSSKSRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDVQIAISNPSPEVLLTLSKSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKAGFNSSHTSLSSLEDKPSLLGRLSKERAENLSTDLEAGNGRPPLPRDRDSQLEPLLSNER 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01588 733 Pfam Sulfate permease family 92 491 IPR011547 GO:0016020
Spst1g01588 733 SUPERFAMILY SpoIIaa-like 543 665 IPR036513 -
Spst1g01588 733 ProSiteProfiles STAS domain profile. 541 665 IPR002645 -
Spst1g01588 733 PANTHER SULFATE TRANSPORTER 57 670 IPR001902 GO:0016020|GO:0055085
Spst1g01588 733 MobiDBLite consensus disorder prediction 714 733 - -
Spst1g01588 733 FunFam Sulfate transporter 31 521 668 - -
Spst1g01588 733 Pfam STAS domain 542 661 IPR002645 -
Spst1g01588 733 NCBIfam sulfate permease 78 661 IPR001902 GO:0016020|GO:0055085
Spst1g01588 733 CDD STAS_SulP_like_sulfate_transporter 542 658 - -
Spst1g01588 733 Gene3D STAS domain 521 669 IPR036513 -
Spst1g01588 733 MobiDBLite consensus disorder prediction 702 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01588 Spst-Chr1 19789431 19797729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01588 3 689 Inorganic Solute Cotransporters AT5G13550 69.597 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01588 K18059 - gmx:100794754 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01588 1 19789431 19797729 Spst1g01588 1 19789431 19797729 ECH