Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01585 ATGGAGTCTAAAGAAGCAGCAAGTGTGATTTTACAGTTAATGGGTCTTGATAAAGTGCCTGCCCAACATCCTGTCAGAGATATACAGAAAGTGCTCTCTGAGAACTACCTGCAGAAAGTTGCTTCCATTGGTGTCAGAAAGAAGCGTTCATCTCGTCAGCATGATTATTTTGGAATGAATACTAATGAAAAGGATGAATCTGAAGATGTTTTAAAAGTGGTCAAAGCACTCAGGCGAGGTAAGCATCATAACCCATCAAAAGGAAATGGGAAAGAGAATCCTAGTTCTAGCCAAAATTCTCATTTGGCTCATGGGATGCTCCGAGAGATATTTTATCCTGAAAGCATGAACGTCTATCATGAAATGCGAGATAGGAAGAAAATATCCTATCACATGAATTTTGGTAAGCCAAGTTCAAGATGTTTTAGTAAAATTTCAGAGCAGATTTCTATGCAATCTGGAAATGTTACAAATAGGGTCTTAGATACTGCTTCAAATTCATTTTTCAAAGGAAATGAAGTATTTGCCAATATGCTGAAGCCTGCTTCAAATATTTCAGCTAATGAGATCCAATGCAATTCCCCAATCTTCTGTTCAGATGGTCCGTATATAGGCTCTCAAGCCAGGAGGAAAACTTTGGAACAGAGGGATATCACTGAAAAGGTTCATGAACTTGGACGGTGTGGTCAAGACTGTACATATAATCAATGGGCTATGATTTCTGAACATGGAAATGGAGCAAGAAACTTGACTCATCGAAGTGGATACAGTAATGATAGAATTAAAACGAGATGTAAGGCTGGTGTTAATTATAGCTTTGCTAGAAGAATCCCAAGACCTCTCTGTGCAGCTTCTGTTATTGCTGATGATTGTGGAACTATAAATCAGGATATCTTGTTTCAGAGATATTGGGGTTTGAGAAAAAATGCATATGGAATTTGGTCATCATGGAAGTCAAAGAATCAAAATATTGACCAGAAAATATGTTTGGAAAATGTGAACCTCAGTTGTGACGGTGAGAAATTCCCTTCTAGTGATCATACCGAAGAGAATTGTATTGGTCATAAGTCGGAAAAGGGATGCTACGAGAACATTTTGTTTGATAAGATAACTATGCCTCCTCAATTGACAAGTGCTAGTCCTTCTCCCACCTTTATGGACAGACAGATGTTACAAGAGAGATGCTTAATGAATGAAGAGGTGATGAACAAAATGAATGAAGAGAATAATTTGTGTAAGCAAAATGTTGTGTGTCCTGATTCATCAGTTGAATTCTTGGTATCTGATGCAACAGCTGAGGTTGTTGACAGGACACATAGTCCAACTAAACATCAATCTGAATCAACAACAGCCTTCATTTTTTCACAAGAAATTGATTGTTTGAATCATACTTCATATGCTTCAAAGCAACAGGATAGATCAGATTTTCAAGAAGATTCTGTTCATTCTCTTTGCTCCGAGGTTGACCCAGATTTCTTTGGTAGTTTTGAGGAGTCACATGAACCTAATCCAATTTCTGTTTTGGATCACTTATTTGGAGAAGACATTCAATCGGACTACGAAAGTGACGATCATGTGTATGATTCCTCTGAAGTGGAGGATGAAGCATTTGGTTTGAATGTTTCAAGTGATGAAGATTGTGAGAGTGAATATGCACATAACTCTGAAGGAAAGAAAGACACACCAGAATTGTATCGAGCTGAAGAAAGTAGGGATTTCTCGTATGTTGTTGAGGTCTTAACAGAGGCTGGTATAAGTAATAGGAGCTTGTTTACAGACTTTTCTACATGGCACTCTTCAGAATGTCCAATGAACCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGAGCAGCAAATTTGGAAGAGATCTCAAAGGAAACTGCTCTTTGATCGCATTAACATAGGGCTGTCACAAATTCTCGAGCCATATTTGTACATTCCTACGTGGGAAAAGTCCATCTCAAGAAGGTTGAATGCTGAACCAAGCCAGGACATGATTGAAGAGGAAATGTGGGCGTTGCTTGCTGCAGAAGAAGAGAAATCTAGTAATGAGTTTGCAGACAATATGGTTGGAGGGGAAATTAGGTGGATAGAACTTGTTCAAGAGGTTGAAGATATTGTTACAGAGATAGTTAAGTTGTTAACGGAGGAGCTTGCAAATGAGATAGTTTAG 2178 0.3829 MESKEAASVILQLMGLDKVPAQHPVRDIQKVLSENYLQKVASIGVRKKRSSRQHDYFGMNTNEKDESEDVLKVVKALRRGKHHNPSKGNGKENPSSSQNSHLAHGMLREIFYPESMNVYHEMRDRKKISYHMNFGKPSSRCFSKISEQISMQSGNVTNRVLDTASNSFFKGNEVFANMLKPASNISANEIQCNSPIFCSDGPYIGSQARRKTLEQRDITEKVHELGRCGQDCTYNQWAMISEHGNGARNLTHRSGYSNDRIKTRCKAGVNYSFARRIPRPLCAASVIADDCGTINQDILFQRYWGLRKNAYGIWSSWKSKNQNIDQKICLENVNLSCDGEKFPSSDHTEENCIGHKSEKGCYENILFDKITMPPQLTSASPSPTFMDRQMLQERCLMNEEVMNKMNEENNLCKQNVVCPDSSVEFLVSDATAEVVDRTHSPTKHQSESTTAFIFSQEIDCLNHTSYASKQQDRSDFQEDSVHSLCSEVDPDFFGSFEESHEPNPISVLDHLFGEDIQSDYESDDHVYDSSEVEDEAFGLNVSSDEDCESEYAHNSEGKKDTPELYRAEESRDFSYVVEVLTEAGISNRSLFTDFSTWHSSECPMNPSVFEILEKKFGEQQIWKRSQRKLLFDRINIGLSQILEPYLYIPTWEKSISRRLNAEPSQDMIEEEMWALLAAEEEKSSNEFADNMVGGEIRWIELVQEVEDIVTEIVKLLTEELANEIV 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01585 725 PANTHER AFADIN 5 96 - -
Spst1g01585 725 MobiDBLite consensus disorder prediction 79 100 - -
Spst1g01585 725 Pfam Domain of unknown function (DUF4378) 572 723 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01585 Spst-Chr1 19674375 19677798 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01585 485 725 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.418 6.64e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01585 - - vun:114185209 1024.62