Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01563 ATGACTCAGGCGGTGGAGGTGCTGAATCGGTATGGGACGGATATGGTGGGAGAGCCGAGGGGTTCCGAGTCTGAGTGTTTGGCGGGTTTCGAGTGTTTTCTGAACATTGTGAGGGCGCTGGGAATGGGATCGTGCATATCGGAGGTTGGGGGTGGTGGTAGTTCCCCTCCTCTTCTTTCTTATTCGCCTGAATCCAATACGGATGGTGGGAAGAGGAGGAGGTTGAGGAGTTCCTCATCCTTTGATTTCAAAGTGCCTGGTAGGATGTTCTTGAATGGGTCAAGCGAGGTTGCTTCCATGTTTTGTAAGCAAGGAAAAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGCTCAAAGGAAGACGCCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCACAGAGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTTAATGCCCAGTGGGATTTGCATAATAAGAACAGAGATGGACTCAATGATCATAGCAGTGCCACAGGATGTTATAAATCTGAAGGGAATGGATTTAGGCAGGTTGACGAGAAAAGTAGCCCCACTGATCATGAACCTGACGAGAAAAGTAGCCCCACTGATCATGAACTTGGTGGATCAGATACCTTTTTGACATTAAGAGAATCTTTTCTGAAAGCTTGTAAACTTATGGACAAAGAACTGAAAATGCATTCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACCGTGGTCAAGCAAGGGCTGAACCTTGTTATTGGAAATATTGGAGACTCGAGAGCTATACTGGGTACCAGAAATCAAGCTGATTCACTTGTTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGAGGTGGCTCGAGTGTGGCTGCCGAACTCTGATTTCCCTGGTCTTGCTATGGCTCGGGCATTTGGAGATTTTTGCCTGAAGGACTTTGGATTGATTGCTGTTCCAGAGATCTCATTTCACCGCCTTACGGAGAAGGATGAATTTCTTGTATTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTCGTGGACATTGTAGCATCTAATCCACGGTCTACTGCTGCTAGAGCACTGGTTGAGTCAGCTGTTCAGGCATGGAGGACAAAATTTCCCTTTTGCAAGGTTGATGATTGTGCCGCGGTTTGCCTCTTCTTTGATCCAGATACTGATTTCAAGTCAAATGATACCAAAGGGAAGTTGGTACCGGAGGCATCTGTTGACCAATCTGAGCAGTTATCATGA 1353 0.4516 MTQAVEVLNRYGTDMVGEPRGSESECLAGFECFLNIVRALGMGSCISEVGGGGSSPPLLSYSPESNTDGGKRRRLRSSSSFDFKVPGRMFLNGSSEVASMFCKQGKKGINQDAMLVWENFCSKEDAIFCGVFDGHGPYGHRVAKKVRDSFPLKLNAQWDLHNKNRDGLNDHSSATGCYKSEGNGFRQVDEKSSPTDHEPDEKSSPTDHELGGSDTFLTLRESFLKACKLMDKELKMHSDIDCFCSGTTAVTVVKQGLNLVIGNIGDSRAILGTRNQADSLVAVQLTIDLKPNLPREEERIRLRRGRVFSLQNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPEISFHRLTEKDEFLVLATDGIWDVLSNEEVVDIVASNPRSTAARALVESAVQAWRTKFPFCKVDDCAAVCLFFDPDTDFKSNDTKGKLVPEASVDQSEQLS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01563 450 MobiDBLite consensus disorder prediction 429 450 - -
Spst1g01563 450 ProSiteProfiles PPM-type phosphatase domain profile. 97 422 IPR001932 -
Spst1g01563 450 PANTHER PROTEIN PHOSPHATASE 82 420 IPR015655 GO:0004722|GO:0006470
Spst1g01563 450 Pfam Protein phosphatase 2C 181 400 IPR001932 -
Spst1g01563 450 Gene3D - 93 423 IPR036457 -
Spst1g01563 450 SMART PP2C_4 87 420 IPR001932 -
Spst1g01563 450 MobiDBLite consensus disorder prediction 180 213 - -
Spst1g01563 450 MobiDBLite consensus disorder prediction 51 74 - -
Spst1g01563 450 SUPERFAMILY PP2C-like 94 423 IPR036457 -
Spst1g01563 450 CDD PP2Cc 97 422 IPR001932 -
Spst1g01563 450 MobiDBLite consensus disorder prediction 184 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01563 Spst-Chr1 19511495 19515968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01563 84 423 PP2C-type Phosphatase Gene Family AT1G16220 60.116 7.58e-147 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01563 - - gmx:100810538 780.015