Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01534 ATGGAAGCGCGTAGAGCTCCACGCGCCGTCATTGACCCTAAGGTCCGCAGAGTCGGATTTTTCGCCCCGCCTGACCGTTCTCGATCTGGTCCACCCGACCCGATCTCATTTGACATCTCTCCCACCGCCAACTCCCTCTCGCCGGTCATGATCCCGCCGCCACGCCATTCGTCGGAGAGTCTCAGTCTCCATGCTCGTCCCGCTGCGACTTCTCCTTCTGGCGAGGAATCCGTCACTGCCGGGAGCTATTCCAGCTCGTCGGAGTTCTTCCCCGCTCCGATGTCTCCGGCGCCGTCCTCTTACTCGAGCAGGACCATCGCCGACGACGGAGACTTCTTCGACAGCGGTAAGGTGGCATCTTCGTTTCCTCGCGGCGGGTTTGACTTGACGGCGATGAAGGCCAGTAGCGTTCCGGCGAGCGAATTAACCACGGGTGCGGTGGTGAATGCTGATTCCCTTGCCATTCGCGAAAGAGAGAAAGCAGACAAAGGAGGAGGATCAGCAGTGGAAGTGAAAGACCAAGCCTTGAATGCTAAACAGAAGAAAGAAAAGACCACAAAAGCTGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAAGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTCTTGCTTCAGTGAATGTAAAACCAGCTAGAGCTGCAAAGCTCCCACAAAAAGTGGATAATGCTTCAGTTGCAGCCTCTGAGAAGAAAGGGGGTGATCGTCCACAAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCACGTATGCAATATGATGATAAAAGCAGAGTGGATAAAGCCAAACGGCGCGCTGTCGTAAAACAAACTGAGGCTAAGAACAGGGTTGAACTATTCAGGCATCTGCCGCAGTATGAACATGGGAGTCAGCTCCCTGATCTCGAGGCAAAGTTTTTCCAGCTTGGCCCTGTGCATCCTGCTGTTTATAAGGTAGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAAGAGGCCATTAAAGACTACAGGGTTCCAACCGAGAAGACTCTGGTGAGAGACTTGACGGCAAAATTAAGTAGTTATGTTTCTTTTCTCATTGAGTGTCGACCACTTTCTATCAGTATGGGCAATGCAATTAGATTTCTCAAAAGTAGAATTGCCAAGCTACCTTTGACGCTGTCTGAGTCAGAGTCAAAAACCTCTCTTCAATCAGATGTTGAGCGTTTTATAAACGAGAAAATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTATCACAAAAATAAGGGACGGTGATGTTCTTCTTACTTATGGGTCTTCATCAGCAGTTGAAATGATACTGTTGCATGCACACGAGTTAGGGAAACAGTTTCGAGTTGTAGTGGTAGACTCTCGTCCAAGACTTAGAGGGAAACTTTTGCTTCGTAGGCTGGTGGAGAAAGGTCTTAGGTGTACATACACTCATATAAATGCTGTTTCCTACATAATGAATGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCTGGAGTTGGGACTGCGTGTGTTGCAATGGTTGCCCATGCATTCCGTGTCCCTGTTTTAGTGTGTTGTGAGGCGTATAAATTTCATGAAAGGGTGCAGCATGATTCCATTTGCTCAAATGAACTTGGTAATCCAGACATCATTTCTACAGTTCAGAGTAGAGAGGATGTCAACCACTTGGAAGCTTGGGCCAATACTGAAAATCTGCAGCTTCTAAATCTGATCTATGATGCAACACCGTCAGATTACGTATCCATGATAATTACAGATTATGGCATGGTCCCACCCACAAGTGTACCTGTGATTGTAAGGGAGTATAGCAGAGAGCATGTGTGGATATGA 1926 0.472 MEARRAPRAVIDPKVRRVGFFAPPDRSRSGPPDPISFDISPTANSLSPVMIPPPRHSSESLSLHARPAATSPSGEESVTAGSYSSSSEFFPAPMSPAPSSYSSRTIADDGDFFDSGKVASSFPRGGFDLTAMKASSVPASELTTGAVVNADSLAIREREKADKGGGSAVEVKDQALNAKQKKEKTTKAERRALQEAQRAAKAAAKAEGNKASGTLASVNVKPARAAKLPQKVDNASVAASEKKGGDRPQEKDRKKDVPQPRMQYDDKSRVDKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYRVPTEKTLVRDLTAKLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESESKTSLQSDVERFINEKIILANKVIVKHAITKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPRLRGKLLLRRLVEKGLRCTYTHINAVSYIMNEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHAFRVPVLVCCEAYKFHERVQHDSICSNELGNPDIISTVQSREDVNHLEAWANTENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYSREHVWI 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01534 641 MobiDBLite consensus disorder prediction 243 277 - -
Spst1g01534 641 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 42 638 - -
Spst1g01534 641 MobiDBLite consensus disorder prediction 1 114 - -
Spst1g01534 641 MobiDBLite consensus disorder prediction 158 212 - -
Spst1g01534 641 SUPERFAMILY NagB/RpiA/CoA transferase-like 316 634 IPR037171 -
Spst1g01534 641 Gene3D - 428 634 IPR042529 -
Spst1g01534 641 MobiDBLite consensus disorder prediction 175 196 - -
Spst1g01534 641 Coils Coil 176 199 - -
Spst1g01534 641 MobiDBLite consensus disorder prediction 63 106 - -
Spst1g01534 641 Pfam Initiation factor 2 subunit family 332 624 IPR000649 GO:0044237
Spst1g01534 641 MobiDBLite consensus disorder prediction 225 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01534 Spst-Chr1 19155494 19160188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01534 1 641 Eukaryotic Initiation Factors Gene Family AT5G38640 66.566 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01534 K03680 - gmx:100785938 1047.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01534 1 19155494 19160188 Spst1g01534 1 19155494 19160188 ECH