Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01502 ATGAGGCCAATAGCCAGTGTATCATCATCACCAATGAGTAACACTGGGATTAAAATATGGAAGTCACCAATTCCTTATTTGTTTGGAGGGTTAGCAGTAATGCTGGCTCTCATATCTGTGGCATTGGTGATCCTTGTTTGCTCCTACAGAAAACGTGATTCTTCTTCTGAGTCGTCATCATCATCATCATCATCACCTGAAGCTGAAGAAATGAAATCACAGGCAATGACCAAGATCAGAGACGCAAACTCAGAGCCCGAGGTTCTTGTCATAATGGCTGGCGATCACAATCCCACCTTCCTTGCCAAACCAATAATTTCTTCTTCAGTCTACTGCACTTGTGGTGCTCAAGCTGAACCTGAACCTCAACCCCAACCAACTACTTCATCCACTGATGGTTTTGTGAGAGCACGGAACGTGATCACTGAAGATGAGTGTTTCTTTTTGAGAATTTTGGTTTTTCATAATGAAGGATCCCCCGGCTTTTTTCAGAAGAGGACGGGGGATGCCATGAAACGCAGAAGTGTGTATAGTTGGAGTCAAAAGCCAGAAGGATTAAAGTTGCCAAACGCGGCGGCTTGGAATTGGCAACAGTGGAAAATGAGTCAATGGAATGTCCACAACTTGAAAACTTCAAACAAATACAAACCCTTTAAACTGTGGTCGCAGGACATGGGAAACTGTGGTGGATTGGCAAGGTTAGAGGGTTCGACACCTCTCATGTCTCACTCACCAAACATGGAGACACCTCTCAAGTCTTATCAAGACAAGACAGAATTTGATGCAATGATGGATACATACAAAGTGAAAAGGGACTTAAAGCATATTCAAGGACAAGGATTTTACATTCCCTCCAGTTGTGCACATTGTGCTATTGGGACATCTGTATTATGCAATAAAACTGAAACAGATAAGCAGATATCGGGCTATCTATCTCTGGTGTGTGTTGTTTTTGCTTTGAATTGGAATACATACAGCTTTCCTGCCTCAGAAATGGATTCTTTTAAACAAATCTGGGGTAGTGCAGAAGGATGTAGCAGTAGTGAATCTGGTTGGACTATGTATATTGCCTCTCCCATGCAGGAAGATGATGCTGGATGCAGCAATGAAAATGATGGATATCATGACATCTATGGTGATAACAGGAGAAAGAAGCAAGGGGCCAAAGTAGATGAAGAAGAAAGTGATGATTCAATGGCTTCAGATGCTTCTTCAGGTCCGGTTCATTATCACCATGCCTATGGTCACAACCAAACTAGTCATGGAACCGCGGCCTCTAAGAAAGATAAACAAGATCATGGAAGCAAGTGTTCTAAGAAGAATGCAAACAAACAGGAGAAGAAACGTGTTGACAACAGAACAAAAGTTGTATTGAGCTGGTTGACAGAAGAAACAAGAAACATGGCACAAGAAAAGTGGCCTGGGGGCACACGAATGGGGTATGCTGCGCTGGAAAGAGGATTGGACACGAATGCAACAGCAAGGCAATCACAAGTTTTAGGCTCAAAGAAGGAAAGCAAAGGGAAGCGCATTGGTGAAAGATGTCGTGGTCTGTCCATCGGCCAGAAGTACTGA 1575 0.4317 MRPIASVSSSPMSNTGIKIWKSPIPYLFGGLAVMLALISVALVILVCSYRKRDSSSESSSSSSSSPEAEEMKSQAMTKIRDANSEPEVLVIMAGDHNPTFLAKPIISSSVYCTCGAQAEPEPQPQPTTSSTDGFVRARNVITEDECFFLRILVFHNEGSPGFFQKRTGDAMKRRSVYSWSQKPEGLKLPNAAAWNWQQWKMSQWNVHNLKTSNKYKPFKLWSQDMGNCGGLARLEGSTPLMSHSPNMETPLKSYQDKTEFDAMMDTYKVKRDLKHIQGQGFYIPSSCAHCAIGTSVLCNKTETDKQISGYLSLVCVVFALNWNTYSFPASEMDSFKQIWGSAEGCSSSESGWTMYIASPMQEDDAGCSNENDGYHDIYGDNRRKKQGAKVDEEESDDSMASDASSGPVHYHHAYGHNQTSHGTAASKKDKQDHGSKCSKKNANKQEKKRVDNRTKVVLSWLTEETRNMAQEKWPGGTRMGYAALERGLDTNATARQSQVLGSKKESKGKRIGERCRGLSIGQKY 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01502 524 MobiDBLite consensus disorder prediction 375 394 - -
Spst1g01502 524 MobiDBLite consensus disorder prediction 53 71 - -
Spst1g01502 524 MobiDBLite consensus disorder prediction 53 76 - -
Spst1g01502 524 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 9 117 IPR040359 GO:0080143
Spst1g01502 524 MobiDBLite consensus disorder prediction 490 513 - -
Spst1g01502 524 MobiDBLite consensus disorder prediction 366 451 - -
Spst1g01502 524 MobiDBLite consensus disorder prediction 423 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01502 Spst-Chr1 18728138 18734558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01502 20 121 Glutamine Dumper (GDU) Family AT4G25760 45.098 1.52e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01502 - - gmx:113002402 218.394