Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01495 ATGACGATTGGTAGTTTAGCACCTAAGACAGAGAAGAAGAAATCGAGGAAGAACAAGGCAGCGGTTTATGAGAATGCACCTTTGTTGCCAAAAAGTCAGGTTCAGGAGAGTGCTGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGAATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGATTGGTGCCCGGCCTTCTTGCTATCATCATCATGGCCTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAAGTATGGAAAAGCGCTGGTGCAGATATGTGTTATAATCAATAACATTGGTGTGCTGATTGTTTACATGATTATAATCGGTGATGTGCTCTCTGGAACATCTTCCGGTGGAAATCATCACTATGGTATCCTTGAAGGATGGTTTGGCGTGCACTGGTGGACAGGGCGAACATTGGTTGTACTTTTTACAACACTCGCCATATTTGCACCCCTCGCAAGCTTTAAAAGAATTGATTCATTGAGATTCACATCAGCCCTTTCAGTCGCACTAGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTCAAGATAATAAGTGGAGGCGTTGCGATGCCCAGACTCTTCCCGGTCACCACAGATGTGGCATCATTCTTTAGACTATTCACTGTAGTTCCTGTGTTTGTGACTGCCTATATCTGTCACTACAATGTTCACAGCATAGACAATGAACTTGAGGATTCCTCACAGATGCGAGGGGTTGTACAAACTGCCCTGGTTCTATGCTCTTCAGTTTATGTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGATGTGCTGGCAAATTTCGATACCGATCTTGGAATCCCTTTTGGTTCTGTTCTCAATGATGCTGTTCGTATAAGCTACGCAGCACACCTGATGCTTGTATTCCCAGTTGTCTTCTATCCATTGCGGCTCAATATAGATGGTCTCCTCTTCCCTTCATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCTTTGACTATTGCCCTTATTGGTGCTATCTTTCTTGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAGTTTACTGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAG 1259 0.4408 MTIGSLAPKTEKKKSRKNKAAVYENAPLLPKSQVQESAAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGLVPGLLAIIIMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSGGNHHYGILEGWFGVHWWTGRTLVVLFTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIISGGVAMPRLFPVTTDVASFFRLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALVLCSSVYVMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFPSSRPLVLDNFRFASLTIALIGAIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01495 419 PANTHER AMINO ACID TRANSPORTER 45 417 - -
Spst1g01495 419 Pfam Transmembrane amino acid transporter protein 47 417 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01495 Spst-Chr1 18662792 18664767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01495 3 419 Amino Acid or Auxin Permease AAAP Family AT3G30390 70.096 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01495 K14207 - gmx:100796345 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01495 1 18662792 18664767 Spst1g01495 1 18662792 18664767 ECH