Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01468 ATGTATGCTATAGGAGGTAGTGCTAACCCAACCATTTTAAGTGAAGGGAATTTTTATGTAGCACCAAATGACCCAAGTGCAAAACAGGTAGAAATAGTGGCACCAAATGACCCAACCATTGGAAGTTGTGCTCCAAATTACTCACCTTCTCAATCTTTAAGTGTTGCTCCAAGCATACATGAAAGGCCCAATACACCTAACAGGCCAGAAACTTTGCGATCGAGGTTCGGTTTTGTATTGGATCAAAACGGGGAATTAGTATTAATTCATGACCAATCTTAG 282 0.4043 MYAIGGSANPTILSEGNFYVAPNDPSAKQVEIVAPNDPTIGSCAPNYSPSQSLSVAPSIHERPNTPNRPETLRSRFGFVLDQNGELVLIHDQS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01468 93 MobiDBLite consensus disorder prediction 44 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01468 Spst-Chr1 18377957 18380293 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01468 1 30 Polysaccharide Lyase AT1G11920 76.667 3.09e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01468 K01728 - gmx:100807483 75.0997