Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01465 ATGTTTCTGAAATGTTTGGGCTACACAAGTTCATCTAAGAAACGGTATCTAACAGAAATAGAAGAGTTGTGCCATCAATTTTCTCTTGGCGAGCTTAGAAAGTCAACCAACAACTTCGATAGAAACAGACTAATTGGACGTGGAGGATTTGGTGAAGTATATAAAGGGTATCTCCAACATTATGCTGCTTCTAATTACATGGTAGCAGTGAAGCGGTTTTCTGTGGAACACAGTGAAGTGTTCAAGAATGAAATAGAGTTGCTTTGCCAGCTTCGTCACCCTAATTGTGTGTCTCTTATAGGATTCTGCAACCACAAGAAAGAGAAGATTATTGTGTACGAGTACATGTCCAACGAATCTCTAGATCGACACCTAGGGGAACTGTCATGGAAGAAAAGGTTGGAGATATGCATAGGTGCAGCGCGTGGACTACACTACCTTCATGCAGGAGCCAAGCGCACCATCATTCATCGTATTGTCAAACCTAGAACCATTCTTTTGGATGACAACATGCACCCAAAACTCACAGGTTTCTGTATTAGCGTAAAGGGATCACACTTAATGTCAAAGCCAAAGCCTGTTAAAGTAGATATTGTGGCGGGTACTCCTGGATACATGGCTAGGGAGCTTTTCACGGACGATGCCATCACAGATAAATCTGATGTTTATTCTTTTGGCATGGTTCTTCTTGAAGTTGTGTGTGGAAGGAAATACGTAACCATGCCAGTTGAGACAGAATTTCTGGAGAAGCCTGTTGAGGAAAAAGTTGATGCGAGCATCAAGGGAAAGATTGCACCAAAGTGTTGGGAAGTCTTTATAGATATTACCAAAAGATGCGTGATGCATGAACCTGATGAGCGACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGCATGCTTTGTCGTTGCAGGAACAAGCAGATATCACAAACACTAATGGTGATTATAACTTATTTTCCACCACTGTTATTCACCAGGAGGGGAACTAG 990 0.4202 MFLKCLGYTSSSKKRYLTEIEELCHQFSLGELRKSTNNFDRNRLIGRGGFGEVYKGYLQHYAASNYMVAVKRFSVEHSEVFKNEIELLCQLRHPNCVSLIGFCNHKKEKIIVYEYMSNESLDRHLGELSWKKRLEICIGAARGLHYLHAGAKRTIIHRIVKPRTILLDDNMHPKLTGFCISVKGSHLMSKPKPVKVDIVAGTPGYMARELFTDDAITDKSDVYSFGMVLLEVVCGRKYVTMPVETEFLEKPVEEKVDASIKGKIAPKCWEVFIDITKRCVMHEPDERPTMGEVEVELEHALSLQEQADITNTNGDYNLFSTTVIHQEGN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01465 329 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Spst1g01465 329 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
Spst1g01465 329 PANTHER OS07G0166700 PROTEIN 24 304 IPR045272 GO:0004714|GO:0006468
Spst1g01465 329 PIRSF ILK 25 311 - -
Spst1g01465 329 ProSiteProfiles Protein kinase domain profile. 39 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01465 329 Pfam Protein tyrosine and serine/threonine kinase 42 295 IPR001245 GO:0004672|GO:0006468
Spst1g01465 329 SUPERFAMILY Protein kinase-like (PK-like) 13 296 IPR011009 -
Spst1g01465 329 Gene3D Transferase(Phosphotransferase) domain 1 116 323 - -
Spst1g01465 329 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Spst1g01465 329 FunFam Receptor-like protein kinase ANXUR2 116 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01465 Spst-Chr1 18344374 18345443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01465 21 308 Receptor kinase-like Gene Family AT3G51550 42.020 2.79e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01465 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01465 - - gmx:100781132 459.144