Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01464 ATGCAGGTGTCACAAATTGGAACTATGTTTCTCAATTGTTTGGGCATGTGCTGTTCCAAGCTCACAACTAATACAAATTCATCTCGGAGACAGTTTCCAACGGTGATAGAAGAGCTCTGCCATCGATTTTCTCTAACCGATCTTAGGAAATCCACCGACAACTTCGATGAAAACAGAGTAATAGGAGGTGGGTTATTTAGCAAAGTATACAAAGGCAATCTACAACATAACGGTGTTTCTGATTACGTAGTGGCAATAAAGCGATTTAATGAACATGGATGTGAAGCGTTCAAGAAGGAAATAGAAGTGCTATGCCAGCTTCGTCACCCTAGATGTGTGTATCTTATAGGATTCTGCGACCACCAAAATGAGAAGATTCTTGTATATGAGTACATGTCCAATGGATCTCTAGATAAACACCTTCCAGGTGGGAAACTGTCATGGAAGAAAAGGGTAGAGATATGCATAGGCGTAGCACGTGGACTACACTATCTTCACACAGGAGCCAAGCGCTCCATCTTTCACTGTATCCTCAGAGCCAGTACCATTCTCTTGGATGACAGTATGGAGCCAAAACTCGCAGCTTTCGGTCTCAGCGTACAGGGACCACGATTCAATCCAAAGCCTCAGCCGAAACAGATTAATGGAGATCACATTATCGGTCTTGTTGGCTACATGCCTGTGGAGTACGTGATGGATGGCACCGTCACAGATAAATGGGATGTTTTCTCATTTGGATTGATTCTACTACTAGTTGTGTGTGGAATGAATTATTTAGGAATCGTAACAGAAAGGGGATTTCTGAAGCCTATTGAGGAAATGATTGATCCGAACATCAAAGGAAAGATTGCGCCAGAGTGTTGGGAAGTCTTTGTAGGTATCATGGTCAGATGTTTGGAGTATGAACAAAATGAGCGACCAGCAATAGGCGAAGCGGAGGTGGAACTTGAGCATGCTCTTTCTGCTTGGAAGGGAGTCTTTTTTAGATGTAGTATACCTTCTCGAGGAGCTCTTCTTGAGGGATAA 1026 0.4308 MQVSQIGTMFLNCLGMCCSKLTTNTNSSRRQFPTVIEELCHRFSLTDLRKSTDNFDENRVIGGGLFSKVYKGNLQHNGVSDYVVAIKRFNEHGCEAFKKEIEVLCQLRHPRCVYLIGFCDHQNEKILVYEYMSNGSLDKHLPGGKLSWKKRVEICIGVARGLHYLHTGAKRSIFHCILRASTILLDDSMEPKLAAFGLSVQGPRFNPKPQPKQINGDHIIGLVGYMPVEYVMDGTVTDKWDVFSFGLILLLVVCGMNYLGIVTERGFLKPIEEMIDPNIKGKIAPECWEVFVGIMVRCLEYEQNERPAIGEAEVELEHALSAWKGVFFRCSIPSRGALLEG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01464 341 FunFam Receptor-like protein kinase ANXUR2 19 131 - -
Spst1g01464 341 Gene3D Phosphorylase Kinase; domain 1 15 131 - -
Spst1g01464 341 ProSiteProfiles Protein kinase domain profile. 55 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01464 341 ProSitePatterns Protein kinases ATP-binding region signature. 61 87 IPR017441 GO:0005524
Spst1g01464 341 PANTHER OS07G0166700 PROTEIN 39 321 IPR045272 GO:0004714|GO:0006468
Spst1g01464 341 Pfam Protein tyrosine and serine/threonine kinase 58 311 IPR001245 GO:0004672|GO:0006468
Spst1g01464 341 Gene3D Transferase(Phosphotransferase) domain 1 132 325 - -
Spst1g01464 341 SUPERFAMILY Protein kinase-like (PK-like) 29 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01464 Spst-Chr1 18341312 18342945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01464 34 326 Receptor kinase-like Gene Family AT5G59700 39.228 2.55e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01464 PK_Tyr_Ser-Thr 6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01464 - - pvu:PHAVU_008G028600g 447.973