Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01458 ATGAGGCTTGTCATATCCGCTGTATGTGTTCTTGTTCTATTCTCTTATGCAGCTGCGTATGATCCTTTGGATCCAAATGGAAACGTAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTAGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCGGGATGGACCTTGTCGTGGACATGGGCAAAGAAGGAAGTAATATGGTCCATGGTAGGGGCTCAAACCACAGAGCAAGGAGACTGCTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAACCAACAATTCTCAAACTGCTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCAGCAGCAGTTTCATCCTTCCAAGTTAGTGTTGGGCTAGCTGGTACTTCAAACAAGACAGTTAAACTTCCCAAGAACTTCACCCTCTTGGGTCCAGGACCAGGCTACACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACTGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCAAGAAAGAACCCAGGTTGCTGTGTATCTTTGTCATCCTTTTACAATGAGACCATTACCCCTTGTCCCTCTTGTGCCTGTGGCTGCCAGAACAAGAGGAACTGTGTCAAGAGTGATTCTAAACGTATCAACATGCTGGGGATCCACACTCCAAAGAAAGACAATGAACCATTGCTACAGTGCACACATCATATGTGCCCAATTAGGGTACACTGGCACGTGAAGCTCAACTATAAGGACTACTGGCGAGTCAAGGTTGCCGTAACAAATTTCAACTATAGAATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAACGTCACACAAGTTTTCAGCTTTGATTACAAGCCTTTACTTCCCTACGAGTCCATAAATGACACCGGCATGTTCTATGGTATGAAATACTTCAACGATCTCTTGATGGAAGCTGGGCCAACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAAGATAAGGATACATTCACACTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAACGGTGAAGAATGCATGCTGCCACCGCCAGACACCTACCCGATCCTCCCTAACTCTGCCCCTGTGAACCTATTGAACTTCCCAGCATTCATTTTCACAATGCTTGTCATGCTAGCTGTTTGGTGA 1296 0.4583 MRLVISAVCVLVLFSYAAAYDPLDPNGNVTIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLSWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAVSSFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPSCACGCQNKRNCVKSDSKRINMLGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKDKDTFTLKQGWAFPRKVYFNGEECMLPPPDTYPILPNSAPVNLLNFPAFIFTMLVMLAVW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01458 431 PANTHER PROTEIN COBRA 7 424 IPR006918 GO:0010215|GO:0016020
Spst1g01458 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Spst1g01458 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01458 Spst-Chr1 18239120 18241143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01458 17 339 COBRA Gene Family AT5G15630 85.759 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01458 - - gmx:100783410 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01458 1 18239120 18241143 Spst4g00305 4 3527553 3529941 PCT