Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01454 ATGACTCATACAATGAAGATGATAGAAAAGTGTGAAGTTAGTCCTCCACCAGGTTCTGTTCCATCAACCACTATCCCTCTCGCTTTCTTCGATCTTCCATGGCTTTGTTGCCCTCCTCTCAAACGTATCTTCTTCTATCACTTCCCTCATTCCTCCAAACACTTCTTCCAAACTCTCCTTCCAACTCTCAAACACTCTCTTTCCCTCACTCTCCAACACTTCTATCCTTTCTCTTCCAACCTTGTCTTCCCTCCAAAGTCAAACCCCCCTCACATCCTCTACACACAAGCTGACTCTATCTCCTTCACAGTAGCTGAGTCCTCAGCAGATTTCATCTCCCTTGTATCTGATTCCCCAAAAGATATCACAGTTTTGCACCCTTTTGTTCCTGTGTTGCCTCCATCACAAACCTTGGAAGATGGCACGTTTCTGATCCCTCTCATGGCCATTCAGGTCACTGTTATGCCCCGTTCTGGCTTCACCATATGCATCACTTTCAGACACGTGGTTGCTGATGGGAGAGCTTTTCATCACTTCATGAAATTCTGGGCCTCTATTTGTAAGTTCAATGGAGACTTGGGTTTGGCTTCCCTTGCTCTGCCATTGCACAATAGGGACATCATTCAAGACCCCACAGGCCTTAAGCATATTTTCTTACAAGAATTGTCGAATTTGTTACCGGAGAATGTGGAGTCCATGGGTGAAATACGCGATGTTCCTTGTGACATGGTGCGTCAGACGTTTGTCCTGAGCCATGACCAAGTTGTGAAACTCAAGAAATGGGTCTCTGTTGAATGCAAAAGCCATGGTCTAGAATTACCACACCTAACAACCTTTGTGGTGACATGTTCTTTGATTTGGGTTTGTAAGGTGAAATCAGAAGAGATTAAAACTGGTAATTTACTTCCCAGTAATGATGAGTCCTACATCTTGGCCTTTATGGCAGATTGTCGTAATCGTCTTGAATTTTCAATTCCATTGGAATACTTCGGAAATTGTTTGGTTTGTGGCAATGCTGAAGTGAAGAGGAGCAAGCTTGTGGGAGGAAATGGTATTTTGGAGGCAGCCATTGCTATTGGTAGTGAAGTTAGAAATTTGCAACGTGGAACTTTCGAAGGGGCTGAAACATTGATGTCTAATTTTACAGAATTTGCCACGTTGGGGAAGCATATGACAATAATTGCAGGGTCACCAAATCTGGAAGTGTATGAAACTGACTTTGGGTGGGGAAAGCCGAAGAGGAGTGAAGTGGTTCATGCAGATAATTCAGGATTTATTTCCCTTTCTGACTGTAGAGAAAAAGAAGGTCGAATTGAAGTTGGGTTAGCACTTCAAAAAATTCAAATGAAGAAATTCAGTACCATTTTGGAAGAGCACCTCACAGAATTTGGAGTTCTATTGACTAGAAAAGTCTATTCATATGAGTTGCCTTAA 1434 0.4268 MTHTMKMIEKCEVSPPPGSVPSTTIPLAFFDLPWLCCPPLKRIFFYHFPHSSKHFFQTLLPTLKHSLSLTLQHFYPFSSNLVFPPKSNPPHILYTQADSISFTVAESSADFISLVSDSPKDITVLHPFVPVLPPSQTLEDGTFLIPLMAIQVTVMPRSGFTICITFRHVVADGRAFHHFMKFWASICKFNGDLGLASLALPLHNRDIIQDPTGLKHIFLQELSNLLPENVESMGEIRDVPCDMVRQTFVLSHDQVVKLKKWVSVECKSHGLELPHLTTFVVTCSLIWVCKVKSEEIKTGNLLPSNDESYILAFMADCRNRLEFSIPLEYFGNCLVCGNAEVKRSKLVGGNGILEAAIAIGSEVRNLQRGTFEGAETLMSNFTEFATLGKHMTIIAGSPNLEVYETDFGWGKPKRSEVVHADNSGFISLSDCREKEGRIEVGLALQKIQMKKFSTILEEHLTEFGVLLTRKVYSYELP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01454 477 PANTHER - 5 461 - -
Spst1g01454 477 Pfam Transferase family 17 455 - -
Spst1g01454 477 Gene3D - 239 462 IPR023213 -
Spst1g01454 477 Gene3D - 5 232 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01454 Spst-Chr1 18210871 18212304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01454 43 458 Monolignol Biosynthesis Gene Families AT5G48930 22.864 3.19e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01454 - - gmx:100782335 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00301 4 3464502 3465521 Spst1g01454 1 18210871 18212304 PCT