Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01453 ATGTCCAATGGATCGCTATCTCAACACCTGCAACGTGGGGGACTGTCATGGAAGAAGAGACTAGAGATATGCATAGGAGCAGCGCGTGGACTACACTACCTTCATGCTGGAGCCAAGCGCACAATCATTCACTGTGACTTCGGTGTTAGAAGCATTCTTTTAAACGATGACATGGAGCCAAAAATCGCAGATTTCATCTTTTGCCGACAAGGAGCACCTTCTATGTCAAAGCCAAAAACAATTAAAGTGAATTGTATTTGGGGTACTTCAGGCAAGATAGCATGGGAGTATGCCATGTACGGTACAATCACGGATAAATGTGATGTTTACTCATTTGGTACGGTTCTGCTAGAAGTTGCGTGTGGAGGGACATACCATTGGACAGTGGAACCTGAGAAGCCTGTCGAGGATAGCATTGATCCAAATATCAAAAGGAACATTGCACCAGCGTGTTGGAAAGTCTTTGTAGATATCATAGATAGATGTGTGATGTATGAGCCACATGAGAGACCAACAATGGGTGAAGTGGAGTATCCAGCTGTAATACAAGAGTTGTGCCATCAATTTTCTCTCACCGATCTTAGGAAATCAACCGACAAATTTGATCGTAACAGACTAATTGGATATGCAAGCTTTGGTAAAGTATATAAAGGGTGCCTCCAACACAACGATGGTTCTGATTATACAGTAGCAGTAAAGCGATTAAATGCAGAAGACATTCAAGAACACAACCAGTTCAACAAAGAGATAGAGTTGCTCTGCGGGGATACAGAAACGCTGTCATGGAAGAAAAGGATAGAGATATGCATAGGAGTAGCACGTGGACTACACTACCTTCACGCTGGAGCCAAGCGCACCATCATTCATCGTCACATTTGTCTCGCAAACATTCTTCTGGATGATAACATGGAGCCAAAACTCGCAGGTTTCGGCCGTAGCATACAGGGAGCACGCTTTATGTCAAAGCCAAAAGAAATTCCAATAGATGATGATGTTAGGGGTACTTATGGATACCTACCTATGGAGAACTTCAGGGACAGTACCGTCACAGATAAATGTGATGTTTTCTCATTTGGTATGGTTCTTCTAGAAGTTGTGTGTGGAAGAAACTATTTTGACATGGCACCAATAGAGGGATATCTGGAGAAGCCTGTCGAGGAGAATATTGATCTGAATATCAAAGGAAAGATTGTGTCAGAGTGCTGGGAAGTCTTTATAGATATCACCCGAAGATGTGTGAAGTATGAAGCAGAGGAGCGACCAACAATGGGTGAAGTAGAGGTGCAACTTGAGCATGCTCTGTTGTTGCAGGAACAAGCAGATATCACAAACATCCATGGTGATGAATATACCCTATTGTCCAAAACCATCATCAAATTAAAGCCTGAGCGGGAAGATGAGCAAGAGCATGGTTTGTCATTACGTCAAGAAGAAGAAGAAGATATCAGTAACACAGAAGACAGTGACTTAGAAGACATGTTTCATAGATTTGGCCTCTATTTAGCTATGAATACGAGGATTCGAAGTAAAACTTTTGGTGTTGATACCTGCCACCTCGAAGAGCCTTTTGAAGACTGGACCAGAGCAATAAACTTGAGAACATGA 1605 0.4255 MSNGSLSQHLQRGGLSWKKRLEICIGAARGLHYLHAGAKRTIIHCDFGVRSILLNDDMEPKIADFIFCRQGAPSMSKPKTIKVNCIWGTSGKIAWEYAMYGTITDKCDVYSFGTVLLEVACGGTYHWTVEPEKPVEDSIDPNIKRNIAPACWKVFVDIIDRCVMYEPHERPTMGEVEYPAVIQELCHQFSLTDLRKSTDKFDRNRLIGYASFGKVYKGCLQHNDGSDYTVAVKRLNAEDIQEHNQFNKEIELLCGDTETLSWKKRIEICIGVARGLHYLHAGAKRTIIHRHICLANILLDDNMEPKLAGFGRSIQGARFMSKPKEIPIDDDVRGTYGYLPMENFRDSTVTDKCDVFSFGMVLLEVVCGRNYFDMAPIEGYLEKPVEENIDLNIKGKIVSECWEVFIDITRRCVKYEAEERPTMGEVEVQLEHALLLQEQADITNIHGDEYTLLSKTIIKLKPEREDEQEHGLSLRQEEEEDISNTEDSDLEDMFHRFGLYLAMNTRIRSKTFGVDTCHLEEPFEDWTRAINLRT 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01453 534 ProSiteProfiles Protein kinase domain profile. 201 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01453 534 Gene3D Phosphorylase Kinase; domain 1 191 254 - -
Spst1g01453 534 Pfam Protein tyrosine and serine/threonine kinase 258 429 IPR001245 GO:0004672|GO:0006468
Spst1g01453 534 Pfam Protein tyrosine and serine/threonine kinase 1 176 IPR001245 GO:0004672|GO:0006468
Spst1g01453 534 PANTHER OS07G0166700 PROTEIN 186 254 IPR045272 GO:0004714|GO:0006468
Spst1g01453 534 SUPERFAMILY Protein kinase-like (PK-like) 182 434 IPR011009 -
Spst1g01453 534 Gene3D Transferase(Phosphotransferase) domain 1 255 451 - -
Spst1g01453 534 Gene3D Transferase(Phosphotransferase) domain 1 1 190 - -
Spst1g01453 534 MobiDBLite consensus disorder prediction 468 487 - -
Spst1g01453 534 SUPERFAMILY Protein kinase-like (PK-like) 1 177 IPR011009 -
Spst1g01453 534 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01453 534 FunFam Receptor-like protein kinase ANXUR2 247 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01453 Spst-Chr1 18206173 18209592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01453 180 441 Receptor kinase-like Gene Family AT3G51550 35.370 2.43e-49 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01453 PK_Tyr_Ser-Thr 1.6e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01453 - - gmx:100812131 366.696