Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01452 ATGCTACTTCAATTGCAGATTATCCATGGAAGCACCGTATCTCGAATTGGTTTAGGAACAATCCTCCTCCTCCTTTTCCTGTTGTTGTGCCTTTCTTTCTATTGCATAGGAGACGATATATATCGTCCCAACGACCTCTTCGGCATCAGCTGTGGCTCATCCACCAACTTCTCCACGCTCGATACTCGGAATTGGACTGCAGACATCAAATTCCTCTCTCCAACCCACCAAGCAGTTGCTGCTCCTCCACTCACACCATCTACCCAACAGGGTCCTTACAACTCCGCTCGTCTCTCTCAATCCCAATTCACCTACTCATTCCCTGTCACCCCAGGCCCTAAGTTCCTTCGCCTTTTCTTCTTCTCAACTTCATACCCCAACTTTGATCGCTCCAAAGCCTGTTTCACTGTCCAAGCAGGCCCATACACCCTCCTTCAAGATTTTAATGCTTCCCTTAATGCGGACGCTGATGACGACCCTGGCAACACCAACGTCTTGTTCAGAGAGTTTTGCGTCCACGTAGGAGATGGTGAGAGGCTCAAAATAACATTCATTCCCAGCGCCACAGATTCGTATGCTTTCATTAATGGAATCGAGATTGTTTCCATGCCCTCTTATCTCTACTACACCAATCCTAAAGTCCACACCGCTGAATTGCCACGTTTTGTTGGAGGAGAAACATATGAAGTTGATAACAACTCGGCTCTCGAAACGATGTACCGGTTAAGATGTGGGGACGCAATTATTCCCGCCTCAGGGGACACGGGTATGCTCAGGATCTGGGATGTGGATACTAAATATGTAATTTCTCAAAGTGTAGAATCTATTGATTTTGGCCATAAAACTAACCTAAGCTTCACTGAGAAGACGCCTAACTACACGGCACCAGACCTTTTGTACCGATCCTTAAGGAATATGGGACCTAATGCCTCTATTAACATTAGCTTCAACCTCACATGGCGGCTTCCTGTTGATCCTGGTTTCACCTACATGCTAAGGTTACACTTTTGCCAGCTTAACCCGCTAGTTAATCAGTCTGGTGACATGATCTTCCTCATCTTCATTCAGGATCATTTGGTTGAAAACATGGTAGATATTTTCTCTTGGACTGATAAACAGAGGGGTGTACCAGTGGTTAGAGACTACGCAGTTAACATCTCAGCCAAAGGGAATCAGAAAAAGGCATATATTTCTCTGAAAATGAGGCCTCACCCTCAAAGCAAGATCATGGACGCACAGCTAAACGCAATTGAACTCTTCAAAATTAACGATCCAACAGGTAATCTCGCTGGACCTGACCCAGACCATCTTCCACAAACCCCAAATGATCAAATGTCAACCAAGAAAAACAACAGCACCATGAGAACACTTGTTTCCGTTGCAGGGGCAGTTTCCAGTGTCGTTTTGTTCTCCTTCATTATCGCTTTCCTCCTCATTAAACGCCGGAAGAACGTCGCCGTCAACAAGGGTTCCAGTAAAAAATACAGAACTTCTCGGGGCAGCAGCTCATTATCGATTCCAACCGACCTCTGCCGCCACTTCTCAATTGCAGAAATGAGAGCCGCCACCAACAACTTCGATGAAGTCTTCGTGGTTGGCGTGGGAGGCTTCGGCAACGTGTACAAAGGCCAGATCGACAACGGCTCAACTACTGTCGCAATCAAAAGGCTGAAACCGGGTTCCCGCCAAGGTATTCGCGAGTTCAGAAACGAGATCCAAACGCTTTCTCCACTTCGTCATCCCAATATCGTTTCCCTCATCGGTTACTGTTACGAGGGCAACGAGATGATCCTCGTTTACGATTTCATGGATCACGGAAGCCTCCGTGACCATCTCTACGACACTGATAACCCATCTTTGTCGTGGAAACATAGGCTCCAGATCTGCATAGATGTTGCGCGAGGATTGCATTATCTGCATAGAGGGGCGAAGCAGGTGATCATTCATCGTGACGTGAAGAGCACCAATATCTTGTTGGATGAGAAATGGGTGGCCAAGGTTTCAGATTTCGGACTATCCCGAATTGGGGAGCCCACCGGCATTTCGATGAGCATCGTGAGTGTGAACACTGAGGTGAAAGGTAGCATCGGGTATTTAGACCCGGAGTATTACAAGCGATTCCTTTTGACGGAGAAGTCCGACGTGTACTCGCTTGGGGTGATGTTGTTGGAGGTGTTATCAGGGAGGCAACCTTTGCTCCATTCTGAGGAGAAGCAACGAATGTCACTTGTTAAATGGGCGAAACATTGCTATGAGAACGGTTCTCTGACTGAGATTGTGGATGAAGAACTCAAGGGCAAGTTAGCACCTCAGTGTTTGCGCAAATTTGTTGAGGTTGCACTGAGTTGTTTGCTTGAGGATGGGACTCAACGACCTTCCATGAACGATCTCGTTGAGCTGTTGGAGTTTGCTCTTCAGCTTCAGGATGATGTTGTTAATTGCGCGGTGGAGAGTCCTGTTAATTTTGAAGATGTACAGTAG 2481 0.4688 MLLQLQIIHGSTVSRIGLGTILLLLFLLLCLSFYCIGDDIYRPNDLFGISCGSSTNFSTLDTRNWTADIKFLSPTHQAVAAPPLTPSTQQGPYNSARLSQSQFTYSFPVTPGPKFLRLFFFSTSYPNFDRSKACFTVQAGPYTLLQDFNASLNADADDDPGNTNVLFREFCVHVGDGERLKITFIPSATDSYAFINGIEIVSMPSYLYYTNPKVHTAELPRFVGGETYEVDNNSALETMYRLRCGDAIIPASGDTGMLRIWDVDTKYVISQSVESIDFGHKTNLSFTEKTPNYTAPDLLYRSLRNMGPNASINISFNLTWRLPVDPGFTYMLRLHFCQLNPLVNQSGDMIFLIFIQDHLVENMVDIFSWTDKQRGVPVVRDYAVNISAKGNQKKAYISLKMRPHPQSKIMDAQLNAIELFKINDPTGNLAGPDPDHLPQTPNDQMSTKKNNSTMRTLVSVAGAVSSVVLFSFIIAFLLIKRRKNVAVNKGSSKKYRTSRGSSSLSIPTDLCRHFSIAEMRAATNNFDEVFVVGVGGFGNVYKGQIDNGSTTVAIKRLKPGSRQGIREFRNEIQTLSPLRHPNIVSLIGYCYEGNEMILVYDFMDHGSLRDHLYDTDNPSLSWKHRLQICIDVARGLHYLHRGAKQVIIHRDVKSTNILLDEKWVAKVSDFGLSRIGEPTGISMSIVSVNTEVKGSIGYLDPEYYKRFLLTEKSDVYSLGVMLLEVLSGRQPLLHSEEKQRMSLVKWAKHCYENGSLTEIVDEELKGKLAPQCLRKFVEVALSCLLEDGTQRPSMNDLVELLEFALQLQDDVVNCAVESPVNFEDVQ 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01452 826 ProSitePatterns Protein kinases ATP-binding region signature. 532 555 IPR017441 GO:0005524
Spst1g01452 826 SMART serkin_6 526 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01452 826 Gene3D - 45 204 - -
Spst1g01452 826 Gene3D - 234 423 - -
Spst1g01452 826 MobiDBLite consensus disorder prediction 428 449 - -
Spst1g01452 826 SUPERFAMILY Protein kinase-like (PK-like) 499 804 IPR011009 -
Spst1g01452 826 FunFam receptor-like protein kinase FERONIA 487 602 - -
Spst1g01452 826 Gene3D Transferase(Phosphotransferase) domain 1 603 818 - -
Spst1g01452 826 FunFam FERONIA receptor-like kinase 46 204 - -
Spst1g01452 826 Pfam Protein tyrosine and serine/threonine kinase 532 801 IPR001245 GO:0004672|GO:0006468
Spst1g01452 826 CDD STKc_IRAK 539 802 - -
Spst1g01452 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Spst1g01452 826 Pfam Malectin-like domain 49 422 IPR024788 -
Spst1g01452 826 PANTHER OS03G0124300 PROTEIN-RELATED 23 488 IPR046957 GO:0004672
Spst1g01452 826 ProSiteProfiles Protein kinase domain profile. 526 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01452 826 Gene3D Phosphorylase Kinase; domain 1 511 602 - -
Spst1g01452 826 FunFam Receptor-like protein kinase FERONIA 603 820 - -
Spst1g01452 826 FunFam FERONIA receptor-like kinase 234 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01452 Spst-Chr1 18202506 18204986 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01452 41 809 Receptor kinase-like Gene Family AT3G51550 44.403 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01452 Malectin_like 5.6e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01452 - - vum:124832507 1122.07