Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01450 ATGGACGAAACTGCCTCTCGAATTGGTTTAGGAACCATCCTACTCCTCCTTTTCACTTTGTTGTTGTTGTGTCTTTCTTTCTGTTGTACAGCAGACGATATATATCGTCCCAATGACCTCTTCAGCATCAGCTGTGGCTCATCCACCAACTTCTCCACTCTCGATACTCGGAATTGGACTGCAGACATCAAATTCCTCTCTCCAACCCACCAAGCAGTTGCTGCTCCTCCACTCACACCATCTACCCAACAGGGTCCTTACAACTCCGCTCGTCTCTCTCAATCCCAATTCACCTACTCATTCCCTGTCACCCCAGGCCCTAAGTTCCTCCGCCTTTTCTTCTACTCAACTTCATACCCCAACTTTGATCGCTCCAAAGCCTGTTTCACTGTCCAAGCAGGCCCATACACCCTCCTTCAACATTTCAATGCTTCCCTTAATGCTGACGCCCATGGCAACCCTGGCAACACCAACATCTTGTTCAGAGAGTATTGTGTCCACGTAGGAGATGGTGAGAGGCTCAAAATAACATTCATTCCCAGCGCCACTGATTCGCATGCTTTCATTAATGGAATCGAGATTGTTTCCATGCCCTCTTATCTCTACTACACCAATCCTGACAAGGACAGCAATGCATTTCCCAAAAGTGCTGAGTCCGGCAACCGATTTCCCATTGAAATCAACAATGCTTTGGAGACAATGTACAGGTTAAGAGTTGGAAAGAGACCTATTCCCTCCTCAGAGGACACGGGTATGCTCAGGACCTGGGATGTCGATACAAAATATGTAACCAGTCCAAGTGCAAATTCTATTGATTTGGACATTAAAACCAAATTGAACTTCACTGAAGAGACTCCTAATTACACAGCACCAGATGCAGTGTATAGATCCTCAAGGAACATGGGCCCTGATGACTCTAACATGAGGTTCAACCTCACATGGCAGTTTGGTGTTGATGTGGGCTTCACCTACTTGCTAAGTTTACACTTTTGCCAGCTTGACCCGGAGGTTAATAAGCCTGGAGACCTCACCTTCCTCATCTTCATTCAGGATCATTTGGTTGAAGAGTGGGCTTCCGTCCTCGCTTGGAGCGGTAAACAGAAGGGTGTACCTATGGTTAGACAGTACACAGTTAACATCCTACCCAATCACGACATGACAAATCTTTCACTTAAAATGCATCCTAACCCTGAAAGCTCGTTCAAGGACGCCCAAATAAACGCAATTGAACTCTTCAAAATCAATGTCTCATCGGGTAATCTCGCTGGACCAAACCCATCCCCTCCTCCAAAATCCTCCGAGGGTCTTATTCAAAGTTCAATCAAGAAAAGCAAAGGCACCACGAGGCCCCGAATTGCCGCCGTCGCCGGTGCAGTTTCTGGTGTTGTTTTACTCTCCTCTATAGTCACTTTCTTCATCATCAAACGCAACAAGAACGTTGCCGTTGACAAAGGTTCCAACCAAAAAGACGAAACTTCTCGCTGGGGTGGCTCATCATCGCTACCAACCAACCTCTGCCGTCACTTCACAATCGCAGAAATCATAGCAGCTACCAACAACTTTGACGAACTCTTCGTGGTTGGCGTTGGAGGTTTCGGTAACGTGTACAAAGGCTACATCGATGCCGGTTCAACACCTGTGGCAATCAAAAGACTCAAACCGGGTTCTCGGCAAGGTCTGAACGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGTCATCTTCATCTTGTTTCCCTCATCGGTTACTGCTACGAGAGAAACGAGATGATACTCGTTTACGATTTCATGGATCGCGGAACCCTCTGCGACCATCTCTACGGCACTGATAACCCTTCGCTCTCATGGAAGCAAAGGCTCCAGATATGCATAGGTGCTGCACGAGGACTGCATTATCTGCATACAGGTGCAAAGCACATGATCATCCACCGTGACGTGAAGAGCACGAACATCTTGTTGGATGAAAAATGGGTAGCAAAAGTTTCGGACTTCGGGTTATCTCGAATTGGACCAACGGGTTCTTCAATAACCCATGTGAGCACTCAGGTGAAAGGTAGTGTTGGGTATTTAGACCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTGTACTCGTTTGGGGTGGTGCTCTTGGAGGTATTATGTGGGAGGCAGCCTTTGCTCCGTATGGTGGAGAAGCAACAGGTGTCACTTGTTGACTGGGCGAAGCATATGTTTGAGAAGGGGTCTCTGGGTGAGATTGTAGATCCTGCACTGAAGTGCCAGATAGCACCTCAGTGTTTGCGCAAATTTGGTGAGGTTGCGCTCAGCTGTTTGCTTGAGGATGGGACTCGGCGACCTTCCATGAACGACGTCGTTGGGGTGCTGGAGTTTGTTCTGCAGCTTCAGCTTCAGGATACTCCTCATGTGAATGTTGTGTTGGGGAATGGTGAGGATTATGAAGACAGTACTACTGAGGACATGTTTAGCAGTAGCCATAGTAGTGTTCATGTTTCAGACTATAGTCATAACAGTGGACTGAGCACTACAAGCTACGGGAGTAAAGAATCTAGCAGGTTGATCCCAGAGCTTGTTTTCTCTGAGATTAAGGATCCAAAGGGACGCTGA 2619 0.4735 MDETASRIGLGTILLLLFTLLLLCLSFCCTADDIYRPNDLFSISCGSSTNFSTLDTRNWTADIKFLSPTHQAVAAPPLTPSTQQGPYNSARLSQSQFTYSFPVTPGPKFLRLFFYSTSYPNFDRSKACFTVQAGPYTLLQHFNASLNADAHGNPGNTNILFREYCVHVGDGERLKITFIPSATDSHAFINGIEIVSMPSYLYYTNPDKDSNAFPKSAESGNRFPIEINNALETMYRLRVGKRPIPSSEDTGMLRTWDVDTKYVTSPSANSIDLDIKTKLNFTEETPNYTAPDAVYRSSRNMGPDDSNMRFNLTWQFGVDVGFTYLLSLHFCQLDPEVNKPGDLTFLIFIQDHLVEEWASVLAWSGKQKGVPMVRQYTVNILPNHDMTNLSLKMHPNPESSFKDAQINAIELFKINVSSGNLAGPNPSPPPKSSEGLIQSSIKKSKGTTRPRIAAVAGAVSGVVLLSSIVTFFIIKRNKNVAVDKGSNQKDETSRWGGSSSLPTNLCRHFTIAEIIAATNNFDELFVVGVGGFGNVYKGYIDAGSTPVAIKRLKPGSRQGLNEFMNEIEMLSQLRHLHLVSLIGYCYERNEMILVYDFMDRGTLCDHLYGTDNPSLSWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSITHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRQPLLRMVEKQQVSLVDWAKHMFEKGSLGEIVDPALKCQIAPQCLRKFGEVALSCLLEDGTRRPSMNDVVGVLEFVLQLQLQDTPHVNVVLGNGEDYEDSTTEDMFSSSHSSVHVSDYSHNSGLSTTSYGSKESSRLIPELVFSEIKDPKGR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01450 872 PANTHER OS03G0124300 PROTEIN-RELATED 14 480 IPR046957 GO:0004672
Spst1g01450 872 FunFam FERONIA receptor-like kinase 229 415 - -
Spst1g01450 872 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01450 872 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01450 872 ProSitePatterns Protein kinases ATP-binding region signature. 527 550 IPR017441 GO:0005524
Spst1g01450 872 FunFam receptor-like protein kinase FERONIA 482 597 - -
Spst1g01450 872 Pfam Protein tyrosine and serine/threonine kinase 527 791 IPR001245 GO:0004672|GO:0006468
Spst1g01450 872 Gene3D - 229 416 - -
Spst1g01450 872 Gene3D - 38 198 - -
Spst1g01450 872 Gene3D Transferase(Phosphotransferase) domain 1 598 809 - -
Spst1g01450 872 MobiDBLite consensus disorder prediction 834 855 - -
Spst1g01450 872 FunFam FERONIA receptor-like kinase 40 198 - -
Spst1g01450 872 CDD STKc_IRAK 536 794 - -
Spst1g01450 872 Pfam Malectin-like domain 43 414 IPR024788 -
Spst1g01450 872 SUPERFAMILY Protein kinase-like (PK-like) 500 796 IPR011009 -
Spst1g01450 872 FunFam Receptor-like protein kinase FERONIA 598 811 - -
Spst1g01450 872 Gene3D Phosphorylase Kinase; domain 1 506 597 - -
Spst1g01450 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Spst1g01450 872 MobiDBLite consensus disorder prediction 420 444 - -
Spst1g01450 872 MobiDBLite consensus disorder prediction 834 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01450 Spst-Chr1 18176372 18178990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01450 35 872 Receptor kinase-like Gene Family AT3G51550 46.050 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01450 Malectin_like 1.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01450 - - vun:114186088 1304.27