Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01446 ATGGTGGTAGAAACATTCTTTTTTTTGGATTTTTCCTGGAGCAGCATTAGGTTGGTGCTTACACAACTCCACCACCCCAATCCTGTGCCTCCTGTGATTGGATTTTGCAATGAAGGAAACAAGTTTGTTCTCGAATATGAGTACATGACTGCTGGTTCGCTCCATGATCACATTTATCACAAGAGGACTAAAGTTGCCTCACTTTTGTATAAGAGGAAGCTTCAAATTTACTTGTGCGTGGAACGCGGACTGCACTATTTTCTTCACACAAGAGTCAAGTATTTAATACATTCTGAAAACATGTAA 306 0.3987 MVVETFFFLDFSWSSIRLVLTQLHHPNPVPPVIGFCNEGNKFVLEYEYMTAGSLHDHIYHKRTKVASLLYKRKLQIYLCVERGLHYFLHTRVKYLIHSENM 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01446 101 Gene3D Transferase(Phosphotransferase) domain 1 13 101 - -
Spst1g01446 101 PANTHER OS07G0166700 PROTEIN 19 97 IPR045272 GO:0004714|GO:0006468
Spst1g01446 101 SUPERFAMILY Protein kinase-like (PK-like) 18 88 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01446 Spst-Chr1 18147240 18147545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01446 19 96 Receptor kinase-like Gene Family AT5G39000 44.304 2.63e-14 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01446 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01446 - - adu:107473893 82.0333