Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g01445 | ATGGTTGAGGCAGTTGTGTCCTTTGCAGTTGATAGGCTTGCTGATCTACTGATTGAAGAGGCCAGATTGTTAAAGGGGGTGAGTGACGAGGTCAAAAGCATGCAAAATGAACTAAAGAGGATGCAATGCTTCCTAAGAGATGCTGAGCGCAGGCAGGATGAAGGTGATACTATAAAGAATTATATTTCGGAGGTTAGAAAATTAGCCTACGATGCAGAGGACGTGATTGAAATTTATGCTATTAAGGTTGCATTTGGCATAAGTATTGGAACTAGAAATCCACTCTCCAGAACTAAACATATTCACAAAGTTGGCTCTGAGCTCGTATCAATCAATTCTCGAATATCTGACCTCACAAGAAGCTTACAAACTTATGGTTTGACTGCAACAAAAGACAATGAAGAGGCATCTGAGGTGAAAAGAGAATTGAGATGGTCTTATTCTCACATTGTTGAAGAGTTCATTGTTGGCTTAGATAAGGATATAAACAAAGTGGCAGAATGGCTATTAAATGAAAGTCAGGACTGTCGATTCGCTTATATTTGTGGAATGGGTGGTCTTGGTAAAACTACACTTGCCAAAGGCATTTACCATTACAATGCAATTAGGCGAAACTTTGATGGTTTTGCGTGGGCCTATATATCTCAGCAATGCAAGAAAAGGGACGTTTGGGAGGGAATTTTACTGAAGCTTATTTCTCCTACCAAAGAGGAAAGGGATGAGATTACGAAAATGAAAGATGATGAACTAGCAAGGAAGTTGTTTAAAGTTCAGCAAGATAAAAAATGTTTGATCATCCTGGATGACATATGGAGCAATGAGGCATGGGACATTTTAAGTCCTGCATTTCCATCTCAAAATACAAGGACTAAGATAGTTTTTACATCCCGCAATAAAGACATTTCATTGCATGTGGATCCTGAAGGCTTGCTTCACGAACCTAGTTGCTTAAATGCAGAGGACAGTTGGGCATTGTTTAAGAAAAAAGCTTTCCCAAGACAAGATAACCCAGAATCCACAATTTCTGATAACTTCAAAAGATTAGGCAGAGAAATGGTTGCAAAGTGCGGTGGTCTGCCTTTGGCTATCATTGTTCTTGGAGGGCTTTTGGCTACAAAGGAGTCAGTCCCCGAGTGGGAAAAAATACATAAGCATCTAAGTTCATACCTAATGGGAGGAGAGATACGTGATAGGAGAAGATTAGATGAAGTGTTGGATTTAAGTTATCAGGACTTGCCTTGTCAACTGAAACCATGTTTTCTCTATTTAAGTCAATTCCCTGAAGATTCTGAGATACCAAAAACTAAACTAATGCAGTTATGGGTAGCAGAAGGTGTTGTTTCGTCTCAATATGAGATTGGACGGGATGAGACAATGGAGGATGTTGCTGAACGCTTCCTAGGTAACTTAATTAGCCGCTGCATGGTTCAAGTTGGTCAGAAGGGGTCTACTGGTCGGATTAAAACCTGCAGGCTCCATGATTTAATGCGTGATCTGTGTTGGTCCAAGGCCAGAAAAGAAAATTTTCTCTACATTATTAATAGATCACAACAAAATAGTACCATTGATGTTACTTCATCTAATGTATCAGATGCAAGGCAAATTGATGAGGTTCGTAGGTTTGCTGTCTACTTGGATCAACATATTGATCAGTTGATTCCACAAGACAAGCAAGTGAATGAACACCTCAGATCCCTTGTATTTTTTCATGACAAGAAGTGTAGGATGGAAAATTGGGACCTAGTCAGAGGCATTTTTGTGAAGTTCAAATTACTTAGAGTTCTAGATCTTGAAGGAATTAAGGGACTGAAGGGACAATCATTGCCTAAAGAAGTGGGGAATCTTTTATGGTTGAAGTTTCTGAGCCTGAAAAGGACTCGTATTCAAGTGCTGCCATCTTCCTTGGGTAATTTGGAGAATCTGCAGTTCCTAAATTTGCAAACTGTCAATAAAGTGAGCTGGGATTCAACAGTGGAAATTCCAAATGTAATATGTAAGTTGAAACGGTTGAGGCATCTATATCTTCCAAATTGGTGTGGGAATATTTCTAACAACCTGAAATTAGAAAATTTGACTAATTTACAGACGTTAGTAAATTTTCCTGCCAGCAAATGTGATGTTAAAGATCTATTGAAGTTAAAAAAGCTCAGAAAGTTAGTACTGAATGACCCAAGACATTTTCAAAAGTTTAGTGAAAGTTTCAGTCCCCCTAATAAAAGGTTGGATTGCCTTCTATCCTTGTCTTTAAGGACTGACATGCTCTCTTTCCCTGAAAATGTGGTAGATGTTGAAAAATTGGTGTTAGGCTGTCCTTCCCTCCGTAAGCTGCAGGTTGAAGGGCGGATGGAAAGGCTGCCAGATGCCTCACTGTTTCCTCCACAGCTTTCAAAGTTGACTATATGGGGTTGCAGACTTGTGGATGATCCAATGGCAACACTAGAGAAGCTTCCTAACTTGAAGTTTCTAAATGGGTGGGATATGTTTGTTGGAAAGAAAATGGCATGCTCACGAAATGGTTTCCCTCAACTTGAGGTTCTAGTACTTCGTGGCTTGCACAATTTAGATGAGTGGACAATAGAGAATCAAGCCATGCCTAATCTTCACCGATTGAGCATATCTGATTGCAACAATTTAAAGGCGGTTCCTGATGGGCTAAAATATATTACTAGTCTTCGGGAGCTAGAAATCAGATGGATGCCTAAATCATTCAAGACCAGGCTTGGAACTGCTGGAGAGGATTACCAGAGAGTCCAACATGTTCCATCTATTGTATTTTTGAACTAA | 2784 | 0.3962 | MVEAVVSFAVDRLADLLIEEARLLKGVSDEVKSMQNELKRMQCFLRDAERRQDEGDTIKNYISEVRKLAYDAEDVIEIYAIKVAFGISIGTRNPLSRTKHIHKVGSELVSINSRISDLTRSLQTYGLTATKDNEEASEVKRELRWSYSHIVEEFIVGLDKDINKVAEWLLNESQDCRFAYICGMGGLGKTTLAKGIYHYNAIRRNFDGFAWAYISQQCKKRDVWEGILLKLISPTKEERDEITKMKDDELARKLFKVQQDKKCLIILDDIWSNEAWDILSPAFPSQNTRTKIVFTSRNKDISLHVDPEGLLHEPSCLNAEDSWALFKKKAFPRQDNPESTISDNFKRLGREMVAKCGGLPLAIIVLGGLLATKESVPEWEKIHKHLSSYLMGGEIRDRRRLDEVLDLSYQDLPCQLKPCFLYLSQFPEDSEIPKTKLMQLWVAEGVVSSQYEIGRDETMEDVAERFLGNLISRCMVQVGQKGSTGRIKTCRLHDLMRDLCWSKARKENFLYIINRSQQNSTIDVTSSNVSDARQIDEVRRFAVYLDQHIDQLIPQDKQVNEHLRSLVFFHDKKCRMENWDLVRGIFVKFKLLRVLDLEGIKGLKGQSLPKEVGNLLWLKFLSLKRTRIQVLPSSLGNLENLQFLNLQTVNKVSWDSTVEIPNVICKLKRLRHLYLPNWCGNISNNLKLENLTNLQTLVNFPASKCDVKDLLKLKKLRKLVLNDPRHFQKFSESFSPPNKRLDCLLSLSLRTDMLSFPENVVDVEKLVLGCPSLRKLQVEGRMERLPDASLFPPQLSKLTIWGCRLVDDPMATLEKLPNLKFLNGWDMFVGKKMACSRNGFPQLEVLVLRGLHNLDEWTIENQAMPNLHRLSISDCNNLKAVPDGLKYITSLRELEIRWMPKSFKTRLGTAGEDYQRVQHVPSIVFLN | 927 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g01445 | 927 | Gene3D | - | 316 | 413 | IPR042197 | - | |
Spst1g01445 | 927 | CDD | RX-CC_like | 3 | 120 | IPR038005 | - | |
Spst1g01445 | 927 | SUPERFAMILY | L domain-like | 492 | 903 | - | - | |
Spst1g01445 | 927 | Gene3D | - | 140 | 308 | IPR027417 | - | |
Spst1g01445 | 927 | Pfam | NB-ARC domain | 159 | 410 | IPR002182 | GO:0043531 | |
Spst1g01445 | 927 | Gene3D | - | 5 | 116 | - | - | |
Spst1g01445 | 927 | FunFam | Probable disease resistance protein At1g63360 | 409 | 502 | - | - | |
Spst1g01445 | 927 | PRINTS | Disease resistance protein signature | 356 | 370 | - | - | |
Spst1g01445 | 927 | PRINTS | Disease resistance protein signature | 257 | 271 | - | - | |
Spst1g01445 | 927 | PRINTS | Disease resistance protein signature | 178 | 193 | - | - | |
Spst1g01445 | 927 | PRINTS | Disease resistance protein signature | 862 | 878 | - | - | |
Spst1g01445 | 927 | FunFam | Probable disease resistance protein At1g61300 | 137 | 308 | - | - | |
Spst1g01445 | 927 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 31 | 876 | IPR044974 | GO:0006952 | |
Spst1g01445 | 927 | Coils | Coil | 31 | 51 | - | - | |
Spst1g01445 | 927 | FunFam | Probable disease resistance protein At5g66910 | 316 | 408 | - | - | |
Spst1g01445 | 927 | Gene3D | Ribonuclease Inhibitor | 527 | 911 | IPR032675 | - | |
Spst1g01445 | 927 | Gene3D | - | 415 | 501 | IPR036388 | - | |
Spst1g01445 | 927 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 139 | 423 | IPR027417 | - | |
Spst1g01445 | 927 | Pfam | Rx N-terminal domain | 5 | 83 | IPR041118 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g01445 | Spst-Chr1 | 18143091 | 18146741 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g01445 | 156 | 927 | WRKY Transcription Factor Family | AT5G45050 | 21.848 | 9.09e-07 | 51.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g01445 | - | - | vra:106759398 | 1694.09 |