Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01445 ATGGTTGAGGCAGTTGTGTCCTTTGCAGTTGATAGGCTTGCTGATCTACTGATTGAAGAGGCCAGATTGTTAAAGGGGGTGAGTGACGAGGTCAAAAGCATGCAAAATGAACTAAAGAGGATGCAATGCTTCCTAAGAGATGCTGAGCGCAGGCAGGATGAAGGTGATACTATAAAGAATTATATTTCGGAGGTTAGAAAATTAGCCTACGATGCAGAGGACGTGATTGAAATTTATGCTATTAAGGTTGCATTTGGCATAAGTATTGGAACTAGAAATCCACTCTCCAGAACTAAACATATTCACAAAGTTGGCTCTGAGCTCGTATCAATCAATTCTCGAATATCTGACCTCACAAGAAGCTTACAAACTTATGGTTTGACTGCAACAAAAGACAATGAAGAGGCATCTGAGGTGAAAAGAGAATTGAGATGGTCTTATTCTCACATTGTTGAAGAGTTCATTGTTGGCTTAGATAAGGATATAAACAAAGTGGCAGAATGGCTATTAAATGAAAGTCAGGACTGTCGATTCGCTTATATTTGTGGAATGGGTGGTCTTGGTAAAACTACACTTGCCAAAGGCATTTACCATTACAATGCAATTAGGCGAAACTTTGATGGTTTTGCGTGGGCCTATATATCTCAGCAATGCAAGAAAAGGGACGTTTGGGAGGGAATTTTACTGAAGCTTATTTCTCCTACCAAAGAGGAAAGGGATGAGATTACGAAAATGAAAGATGATGAACTAGCAAGGAAGTTGTTTAAAGTTCAGCAAGATAAAAAATGTTTGATCATCCTGGATGACATATGGAGCAATGAGGCATGGGACATTTTAAGTCCTGCATTTCCATCTCAAAATACAAGGACTAAGATAGTTTTTACATCCCGCAATAAAGACATTTCATTGCATGTGGATCCTGAAGGCTTGCTTCACGAACCTAGTTGCTTAAATGCAGAGGACAGTTGGGCATTGTTTAAGAAAAAAGCTTTCCCAAGACAAGATAACCCAGAATCCACAATTTCTGATAACTTCAAAAGATTAGGCAGAGAAATGGTTGCAAAGTGCGGTGGTCTGCCTTTGGCTATCATTGTTCTTGGAGGGCTTTTGGCTACAAAGGAGTCAGTCCCCGAGTGGGAAAAAATACATAAGCATCTAAGTTCATACCTAATGGGAGGAGAGATACGTGATAGGAGAAGATTAGATGAAGTGTTGGATTTAAGTTATCAGGACTTGCCTTGTCAACTGAAACCATGTTTTCTCTATTTAAGTCAATTCCCTGAAGATTCTGAGATACCAAAAACTAAACTAATGCAGTTATGGGTAGCAGAAGGTGTTGTTTCGTCTCAATATGAGATTGGACGGGATGAGACAATGGAGGATGTTGCTGAACGCTTCCTAGGTAACTTAATTAGCCGCTGCATGGTTCAAGTTGGTCAGAAGGGGTCTACTGGTCGGATTAAAACCTGCAGGCTCCATGATTTAATGCGTGATCTGTGTTGGTCCAAGGCCAGAAAAGAAAATTTTCTCTACATTATTAATAGATCACAACAAAATAGTACCATTGATGTTACTTCATCTAATGTATCAGATGCAAGGCAAATTGATGAGGTTCGTAGGTTTGCTGTCTACTTGGATCAACATATTGATCAGTTGATTCCACAAGACAAGCAAGTGAATGAACACCTCAGATCCCTTGTATTTTTTCATGACAAGAAGTGTAGGATGGAAAATTGGGACCTAGTCAGAGGCATTTTTGTGAAGTTCAAATTACTTAGAGTTCTAGATCTTGAAGGAATTAAGGGACTGAAGGGACAATCATTGCCTAAAGAAGTGGGGAATCTTTTATGGTTGAAGTTTCTGAGCCTGAAAAGGACTCGTATTCAAGTGCTGCCATCTTCCTTGGGTAATTTGGAGAATCTGCAGTTCCTAAATTTGCAAACTGTCAATAAAGTGAGCTGGGATTCAACAGTGGAAATTCCAAATGTAATATGTAAGTTGAAACGGTTGAGGCATCTATATCTTCCAAATTGGTGTGGGAATATTTCTAACAACCTGAAATTAGAAAATTTGACTAATTTACAGACGTTAGTAAATTTTCCTGCCAGCAAATGTGATGTTAAAGATCTATTGAAGTTAAAAAAGCTCAGAAAGTTAGTACTGAATGACCCAAGACATTTTCAAAAGTTTAGTGAAAGTTTCAGTCCCCCTAATAAAAGGTTGGATTGCCTTCTATCCTTGTCTTTAAGGACTGACATGCTCTCTTTCCCTGAAAATGTGGTAGATGTTGAAAAATTGGTGTTAGGCTGTCCTTCCCTCCGTAAGCTGCAGGTTGAAGGGCGGATGGAAAGGCTGCCAGATGCCTCACTGTTTCCTCCACAGCTTTCAAAGTTGACTATATGGGGTTGCAGACTTGTGGATGATCCAATGGCAACACTAGAGAAGCTTCCTAACTTGAAGTTTCTAAATGGGTGGGATATGTTTGTTGGAAAGAAAATGGCATGCTCACGAAATGGTTTCCCTCAACTTGAGGTTCTAGTACTTCGTGGCTTGCACAATTTAGATGAGTGGACAATAGAGAATCAAGCCATGCCTAATCTTCACCGATTGAGCATATCTGATTGCAACAATTTAAAGGCGGTTCCTGATGGGCTAAAATATATTACTAGTCTTCGGGAGCTAGAAATCAGATGGATGCCTAAATCATTCAAGACCAGGCTTGGAACTGCTGGAGAGGATTACCAGAGAGTCCAACATGTTCCATCTATTGTATTTTTGAACTAA 2784 0.3962 MVEAVVSFAVDRLADLLIEEARLLKGVSDEVKSMQNELKRMQCFLRDAERRQDEGDTIKNYISEVRKLAYDAEDVIEIYAIKVAFGISIGTRNPLSRTKHIHKVGSELVSINSRISDLTRSLQTYGLTATKDNEEASEVKRELRWSYSHIVEEFIVGLDKDINKVAEWLLNESQDCRFAYICGMGGLGKTTLAKGIYHYNAIRRNFDGFAWAYISQQCKKRDVWEGILLKLISPTKEERDEITKMKDDELARKLFKVQQDKKCLIILDDIWSNEAWDILSPAFPSQNTRTKIVFTSRNKDISLHVDPEGLLHEPSCLNAEDSWALFKKKAFPRQDNPESTISDNFKRLGREMVAKCGGLPLAIIVLGGLLATKESVPEWEKIHKHLSSYLMGGEIRDRRRLDEVLDLSYQDLPCQLKPCFLYLSQFPEDSEIPKTKLMQLWVAEGVVSSQYEIGRDETMEDVAERFLGNLISRCMVQVGQKGSTGRIKTCRLHDLMRDLCWSKARKENFLYIINRSQQNSTIDVTSSNVSDARQIDEVRRFAVYLDQHIDQLIPQDKQVNEHLRSLVFFHDKKCRMENWDLVRGIFVKFKLLRVLDLEGIKGLKGQSLPKEVGNLLWLKFLSLKRTRIQVLPSSLGNLENLQFLNLQTVNKVSWDSTVEIPNVICKLKRLRHLYLPNWCGNISNNLKLENLTNLQTLVNFPASKCDVKDLLKLKKLRKLVLNDPRHFQKFSESFSPPNKRLDCLLSLSLRTDMLSFPENVVDVEKLVLGCPSLRKLQVEGRMERLPDASLFPPQLSKLTIWGCRLVDDPMATLEKLPNLKFLNGWDMFVGKKMACSRNGFPQLEVLVLRGLHNLDEWTIENQAMPNLHRLSISDCNNLKAVPDGLKYITSLRELEIRWMPKSFKTRLGTAGEDYQRVQHVPSIVFLN 927
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01445 927 Gene3D - 316 413 IPR042197 -
Spst1g01445 927 CDD RX-CC_like 3 120 IPR038005 -
Spst1g01445 927 SUPERFAMILY L domain-like 492 903 - -
Spst1g01445 927 Gene3D - 140 308 IPR027417 -
Spst1g01445 927 Pfam NB-ARC domain 159 410 IPR002182 GO:0043531
Spst1g01445 927 Gene3D - 5 116 - -
Spst1g01445 927 FunFam Probable disease resistance protein At1g63360 409 502 - -
Spst1g01445 927 PRINTS Disease resistance protein signature 356 370 - -
Spst1g01445 927 PRINTS Disease resistance protein signature 257 271 - -
Spst1g01445 927 PRINTS Disease resistance protein signature 178 193 - -
Spst1g01445 927 PRINTS Disease resistance protein signature 862 878 - -
Spst1g01445 927 FunFam Probable disease resistance protein At1g61300 137 308 - -
Spst1g01445 927 PANTHER DISEASE RESISTANCE PROTEIN RP 31 876 IPR044974 GO:0006952
Spst1g01445 927 Coils Coil 31 51 - -
Spst1g01445 927 FunFam Probable disease resistance protein At5g66910 316 408 - -
Spst1g01445 927 Gene3D Ribonuclease Inhibitor 527 911 IPR032675 -
Spst1g01445 927 Gene3D - 415 501 IPR036388 -
Spst1g01445 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 423 IPR027417 -
Spst1g01445 927 Pfam Rx N-terminal domain 5 83 IPR041118 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g01445 Spst-Chr1 18143091 18146741 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01445 156 927 WRKY Transcription Factor Family AT5G45050 21.848 9.09e-07 51.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01445 - - vra:106759398 1694.09