Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01444 ATGTTTTCTAACAGCTTTCTAAAGTGGCCGATGTTTGTCAAATGTTTGAGCTTCTTCTGTTTGAAGCATACAAGTTCGTCTCAGCGACAGTATCCAACTGTGATAGAAGAGCTATGCCCGCAATTTTCTCTTGCCGATCTTAGCAAATCAACGAACAACTTTGACGAAAACCAGATAATTGGACGTGGAGGCCTTGGTATTGTGTATAAAGGTTCTCTCCAAGACAATTGTGTTACTGATACAGTTGCAATCAAGCGAATATGTGGGAGCACTGAGGAGGAACTTAAGCAGTTCAAGAACGAAATTGAGTTGCTCTGCCAGCTTCGCCATCCAAATTTGATGACTTTGTTAGGATTTTGTGACCAAAAGGACGAGAAGAGTATTGTATATGAGTACATGGAGAAGGGATCTCTCCATGATATTCTATATTGTACTGATATTAAAATGGAACCATTAACATGGAAGCAGAGGCTAAAGATCTGCATAGGAGTAGCAAAGGGACTACATTACCTTCACACAGGTGTCAAGAGAACAATATTTCATCGTGACATAACGCCTTATAAAATTCTTTTGGATAGCAACATGGTGGCCAAACTCTCAGACTTCCGGCTTTCCTTAACAGCACCAAATTATGCATCAAAGCAAAAACCAAAGACAATAATATTAAAAGATGGCTTTATAGGTACATTTGGGTACGTGGCTCCTGAGGTTTCAGCAAACAGTACAGTAACAGAAAAAAGCGATGTTTACTCCTTTGGTGTAGTTCTACTGGAAGTGGTATGCAAAGACAAGCTAAAAAATGTTGAGAAGAGGCAGAAACACCCTGTTGAGGAGAATATTGATCCAAATATCAAAGGAAGGATTGCATCAGAGAGTTGGGAAGTATTTGTGGATATCACAGAGAGATGCTTGATGTTTGATCCAAATGACCGACCATCAATGGGTGAAGTGGAGGCTCAACTTGAGCTTGCTCTGTCACTGCAAGAAGAAGCAGATATAAAAAATCCTTGTGATGATTATACCTTATTATCTGTGACAATTATTAATTAA 1050 0.3924 MFSNSFLKWPMFVKCLSFFCLKHTSSSQRQYPTVIEELCPQFSLADLSKSTNNFDENQIIGRGGLGIVYKGSLQDNCVTDTVAIKRICGSTEEELKQFKNEIELLCQLRHPNLMTLLGFCDQKDEKSIVYEYMEKGSLHDILYCTDIKMEPLTWKQRLKICIGVAKGLHYLHTGVKRTIFHRDITPYKILLDSNMVAKLSDFRLSLTAPNYASKQKPKTIILKDGFIGTFGYVAPEVSANSTVTEKSDVYSFGVVLLEVVCKDKLKNVEKRQKHPVEENIDPNIKGRIASESWEVFVDITERCLMFDPNDRPSMGEVEAQLELALSLQEEADIKNPCDDYTLLSVTIIN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01444 349 FunFam Receptor-like protein kinase ANXUR2 133 343 - -
Spst1g01444 349 Gene3D Transferase(Phosphotransferase) domain 1 133 342 - -
Spst1g01444 349 PANTHER OS07G0166700 PROTEIN 39 328 IPR045272 GO:0004714|GO:0006468
Spst1g01444 349 ProSiteProfiles Protein kinase domain profile. 54 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01444 349 FunFam Receptor-like protein kinase ANXUR2 20 132 - -
Spst1g01444 349 SUPERFAMILY Protein kinase-like (PK-like) 45 328 IPR011009 -
Spst1g01444 349 Gene3D Phosphorylase Kinase; domain 1 16 132 - -
Spst1g01444 349 Pfam Protein tyrosine and serine/threonine kinase 57 321 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01444 Spst-Chr1 18089978 18091106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01444 25 335 Receptor kinase-like Gene Family AT5G38990 42.945 2.61e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst1g01444 PK_Tyr_Ser-Thr 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01444 - - gmx:100779112 533.487