Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01443 ATGGGTAACATATGCGCTCGTTTGAAGGCGAAGCCCGCGCCGCCGCACTCCTCCGCCGTGAAGAAGCGCTCCTCCTCCCGTAGAGAGAGGAAGCTCGACGACGCCGCAATTCGCGAGCAGGCCATCGCCGCCGCGATTCTCTTCAAGCAGCATCAGCAGCAGCAGAACTTCGATCGCTCCACTTCGCTTAGGTACCCGAATGGAGTCTCGAAGAAGAACAGCAGCAGCAGCAACACCTTGCCGAGGAGTTCGAGCTCCAGGGCCAGGTCCCTCACCGACCCTCTCCTACAACCTCATCAGCTTCTCAATCAGGATGTGAAGGTAGATGATCTTGAGACAAATCATATTGTTCTCGTTCATGGAGGTGGCTTCGGGGCCTGGTGTTGGTATAAATCTATTGCACTTCTAGAAGAAAGTGGTTATAAAGTAGCTGCAATAGATTTAACTGGTTCTGGAGTGAGTTCATTTGATACAAACAGCATTACAAGTTTGTCACAATATGTGAAGCCACTTACTGACTTCCTTGAAAAACTTCCAGAAGGCCAAAAGGTGATTTTGGTTGGGCACGATTTTGGAGGGGCATGTATATCATATGCAATGGAGATGTTTCCTCTTAAGATTTCCAAAGCTGTGTTTATTGCTGCTGCAATGCTGAGTAGTGGACAAAGCACTCTCGATATTATTTCTCAACAGGCAGGTTCAGACGATCTTATGCAACAGGCTCAGATTTTTATATATGCTAATGGGAATGATCGTCCTCCCACTTCTTTTGATCTGGACAAGTCATTGTTGAAGGATTTGTTATTCAACCAAAGTCCCTCCAAAGATGTTGCATTAGCATCTGTCTCCATGAGGTCTGTACCATTTGCACCAGTTTTAGAGAAGCTTTCCCTTTCAGACCTGAAATATGGATCTGTTAGGCGGTTTTACATACAAACTCTTGAAGATAATGCCACACCCATTTCACTCCAGGAGAACATGATAAATGCAAGCCCCCCAGAAAAGGTTTTCCGTTTGAAGGGGGCTGATCATTCTCCTTTTTTCTCAAAGCCTCAAGCCCTGCATAAGTTATTGGTAGAAATCTCAAAGATCCTCTGA 1098 0.4617 MGNICARLKAKPAPPHSSAVKKRSSSRRERKLDDAAIREQAIAAAILFKQHQQQQNFDRSTSLRYPNGVSKKNSSSSNTLPRSSSSRARSLTDPLLQPHQLLNQDVKVDDLETNHIVLVHGGGFGAWCWYKSIALLEESGYKVAAIDLTGSGVSSFDTNSITSLSQYVKPLTDFLEKLPEGQKVILVGHDFGGACISYAMEMFPLKISKAVFIAAAMLSSGQSTLDIISQQAGSDDLMQQAQIFIYANGNDRPPTSFDLDKSLLKDLLFNQSPSKDVALASVSMRSVPFAPVLEKLSLSDLKYGSVRRFYIQTLEDNATPISLQENMINASPPEKVFRLKGADHSPFFSKPQALHKLLVEISKIL 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01443 365 Pfam alpha/beta hydrolase fold 114 351 IPR000073 -
Spst1g01443 365 MobiDBLite consensus disorder prediction 57 94 - -
Spst1g01443 365 SUPERFAMILY alpha/beta-Hydrolases 114 360 IPR029058 -
Spst1g01443 365 MobiDBLite consensus disorder prediction 1 32 - -
Spst1g01443 365 PRINTS Epoxide hydrolase signature 186 199 IPR000639 GO:0003824
Spst1g01443 365 PRINTS Epoxide hydrolase signature 339 361 IPR000639 GO:0003824
Spst1g01443 365 PRINTS Epoxide hydrolase signature 120 138 IPR000639 GO:0003824
Spst1g01443 365 PRINTS Epoxide hydrolase signature 140 155 IPR000639 GO:0003824
Spst1g01443 365 PANTHER METHYLESTERASE FAMILY MEMBER 113 362 IPR045889 -
Spst1g01443 365 Gene3D alpha/beta hydrolase 107 363 IPR029058 -
Spst1g01443 365 FunFam putative methylesterase 11, chloroplastic 110 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01443 Spst-Chr1 18082146 18086606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01443 29 187 Miscellaneous Gene Families AT3G29770 63.804 2.66e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01443 - - gmx:100818550 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01443 1 18082146 18086606 Spst1g01443 1 18082146 18086606 ECH