Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01436 ATGCATGTGGTACAAGTTTTCAGTGTAGCACCAACTTTGGAATCAGAAGAATTACCAACTCAGACATCGCTTCCCCTCACCTTCTTTGACATACTATGGTTAAGGTCACCTCCTACTCAACGTATCCTCTTCTACCAATTCTCTCACCCAACCCCACCCTTCTTCCATACCCTTCTTCCCAAACTCATACACTCTCTTTCTCTTGCTCTAGGCCACTTCTTTCCTCTTGCAGGCCACCTCACTTGGCCCCTTCACTCCCAAAACCCCATCATCAATTACAAAACCGGTGACATCGTTTCTCTCACAGTAGCTGAATCTGATGCTGATTTCAACCATCTAGCTGGCTCGGATCTTTGCGAAACTGAAAAAATGCACCATCTTTTACCTCACTTGACCGTATCCCATGAACAAGCTACACTTTTAGCCTTGCAAGTTACTCTATTTCCAAAGTCTGGATTTTCCATTGGAATAACCTCTCACCATGCTGTTCTTGATGGCAATACTTCAACATCGTTTATCAAATCCTGGGCTTATCTTTGTAGAGAATCACACACATCCCCTTGTTTGCCACCTGAACTATGTCCTTTCTATGAAAGAATGTTAGTAAAAGACCCCAACCAATTAGGGGGAAAATTCGTTAATAATTGGTTAAAGCAGGGAGGATTTAACAACAGAAGCCTCCTGGTTTGGGATGTGCAAGCTCCGGAACATGCAACTGGAGGCTTATTTCAATTGTCTAGTTCAGATATTGAAAAGCTGAAGCACTTTGTTTTGTCCAAGCACAGAGGGAAGAGCACCAACCTTCACTTGTCAACGTTTGCGTTGTCTCTTGCCTATGCATGGGTTTGCAGGGTGAGAGCAGAGGAAATAGAAAACAAGAGAGTTACGTTGATTCTGACTGTGGATTGCAGGGGTTGTTTGGAGCCACCTCTTCCTCCGACCTATTTTGGGAACTGTGTTGGGTTAAAACTTGCATTTGCTGAAAAAAGTGAATTCTTGGGGGAGGATGGACTAATTGTGGCTGTGGAAGCACTAAGTGAAGCTTTGGAAACTGTGAAGAAGGATGGTGTTCTGAATGGAGCTGAAAATTGGTCATCATGGTTGCTTGATGGTGTGGGAGGTGAAGCTGATGCGAAGACAATTGGAGTTGCAGGGTCAGCGAGTTTTGAGGCTTATAGTAGTGACTTTGGTTGGGGAAGACCAAAGAAGGTGGAGACGGTGTCCATTGAAAGAACTGCAGTGATTAGTCTTTCAAGTAGCAACAATGGAGAAGGAATTGAGATAGGTTTTGTGTCCAAGAAAACAACAATGGAGACCTTTGCTTCCCTCTTTGTTAAAGGTCTTCAAACTTGA 1353 0.4375 MHVVQVFSVAPTLESEELPTQTSLPLTFFDILWLRSPPTQRILFYQFSHPTPPFFHTLLPKLIHSLSLALGHFFPLAGHLTWPLHSQNPIINYKTGDIVSLTVAESDADFNHLAGSDLCETEKMHHLLPHLTVSHEQATLLALQVTLFPKSGFSIGITSHHAVLDGNTSTSFIKSWAYLCRESHTSPCLPPELCPFYERMLVKDPNQLGGKFVNNWLKQGGFNNRSLLVWDVQAPEHATGGLFQLSSSDIEKLKHFVLSKHRGKSTNLHLSTFALSLAYAWVCRVRAEEIENKRVTLILTVDCRGCLEPPLPPTYFGNCVGLKLAFAEKSEFLGEDGLIVAVEALSEALETVKKDGVLNGAENWSSWLLDGVGGEADAKTIGVAGSASFEAYSSDFGWGRPKKVETVSIERTAVISLSSSNNGEGIEIGFVSKKTTMETFASLFVKGLQT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01436 450 SUPERFAMILY CoA-dependent acyltransferases 267 409 - -
Spst1g01436 450 Gene3D - 234 450 IPR023213 -
Spst1g01436 450 Gene3D - 1 226 IPR023213 -
Spst1g01436 450 Pfam Transferase family 15 442 - -
Spst1g01436 450 PANTHER - 3 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01436 Spst-Chr1 18004538 18005890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01436 65 401 Monolignol Biosynthesis Gene Families AT5G48930 25.281 2.82e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01436 - - vun:114186114 772.311