Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01433 ATGGCTTCTCGTAACATCAAAATCCACGAACACTGTACTGTTGCTCCTCCCTCTGCATCCCAAATATCCCTCCCTCTCACCTTCTTTGACCTGTTCTGGCTCAGGTTCCACCCTGTGGAACGCATCTTCTTCTACACCCTCCCTACACCTCATTCACACCCACCCATTTTCTACACCCAAGTTGTTCCAAAGCTCAAAACTTCCCTCTCTCACACCCTCCAATACTTCTCCCCTCTTGCCGGCAACGTTGTGTGGCCCAACGGTTCTTCCAGCCCCGTCGTTCAGTACACCCCTGGCGACGCCGTTTCACTGGTCCTTGCAGAATCCGAATCCGATTTCGACCACATGTTGGACAACGCACCCAAAGAAGCGTCAGAGTCACGTTGTTTGGTGCCCCACTTGGAATCCTCGGATTCTCATGCCTCTGTTGTCGCTCTCCAAATTACTCTATTCCCTAACAGAGGGTTCGCCATAGGAACCACCACCCATCACGCAGTCCTTGACGGAAAAACTTCAACTGCTTTCATCAAAACTTGGGCTTCTATGTGCAAAATCAATGATGATGACTCAGAGTCATCACCATCTTTGGCTCCAGAGTTGGAGCCTTTCTTTGACAGAACAGTCATCAAAAGCGAGAAGGCGTTAGGGCTCAACTTCAGAACCAATTGGACTGAGATCTTATCCCAATTGTTCCCAAGTGAAAACAGCGACGGAAGATGCTTGAAGCTTCTACCTTTCACTCCAAAGCTGGAGAATCGGGTTCGAGGGGCATTCGCGCTCACTGGAGAAGATCTGGAGAAATTAAGAAATAGGGTGTTTTCCAAGTGGAATAGTGTTGATATAGTTGAAGCAGAATCAAAGTCGAACTCCAGAGTTTCTTCAACAACTCCAACCAAACTGTCGTCCTTTGTTCTAACATGCGCTTATACTTCGGTGTGCATTGCAAAGGCCTACGCCGGAGTTGAAAAGGAGAAAAATAAGTTTGCTTTTGGGTTCACTGTGGATTGCAGGGCGAGATTGGATCCTCCAATTCCTGAAAACTATTTTGGGAACTGTGTGTCGGGGCTTTTGGTGGATGCTAAGCCATGGGAATATACAGAGGAAGAAGGGTTTGTCATTATTGCCAAAAGTATTTATAGTAAAATAAAACAGATGTTAGAAGAGGGTGTTTTTCATGGGGCAGATGGTCTGGCTTCTAGATATGTTAATTTGGCCAAAGAGGGAGTTGAAATCATGGGAATTGCTGGGTCTAACCGTTTTGGGGTTTATGGGAATGATTTCGGGTGGGGAAAGCCTTCCAAGGTAGAGATAGCATCGATTGATAGAGCCTTAACAATTGGATTGGCAGAGAACAGAGAAGTGAAAGGTGGTGTTGAAGTTGAGGTTGTCCTGAAGAAACCTGTGATGGACCTTTTTCAATCTTTGTTCGCTGCAGGATTGTCAGATGAGTGA 1452 0.4642 MASRNIKIHEHCTVAPPSASQISLPLTFFDLFWLRFHPVERIFFYTLPTPHSHPPIFYTQVVPKLKTSLSHTLQYFSPLAGNVVWPNGSSSPVVQYTPGDAVSLVLAESESDFDHMLDNAPKEASESRCLVPHLESSDSHASVVALQITLFPNRGFAIGTTTHHAVLDGKTSTAFIKTWASMCKINDDDSESSPSLAPELEPFFDRTVIKSEKALGLNFRTNWTEILSQLFPSENSDGRCLKLLPFTPKLENRVRGAFALTGEDLEKLRNRVFSKWNSVDIVEAESKSNSRVSSTTPTKLSSFVLTCAYTSVCIAKAYAGVEKEKNKFAFGFTVDCRARLDPPIPENYFGNCVSGLLVDAKPWEYTEEEGFVIIAKSIYSKIKQMLEEGVFHGADGLASRYVNLAKEGVEIMGIAGSNRFGVYGNDFGWGKPSKVEIASIDRALTIGLAENREVKGGVEVEVVLKKPVMDLFQSLFAAGLSDE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01433 483 Gene3D - 249 482 IPR023213 -
Spst1g01433 483 SUPERFAMILY CoA-dependent acyltransferases 300 447 - -
Spst1g01433 483 Gene3D - 5 234 IPR023213 -
Spst1g01433 483 PANTHER - 6 482 - -
Spst1g01433 483 Pfam Transferase family 15 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01433 Spst-Chr1 17926087 17927538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01433 6 476 Monolignol Biosynthesis Gene Families AT5G48930 24.481 1.88e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01433 - - gmx:100814826 687.567