Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01430 ATGGCTTCAAGTAATGGCCGTAAAGCAAGTGAAATCTTTCAAGGTCAAGTTCACTTGTACAAATACTTTTTTGCCCATACAATCGATGCTATGAGTCTTAAATGGATTGTTGAGCTTGGAATACCAGACGTAATCCACAACCATGGTCAGCCCATTACGCTGCCAAAGTTGGTGTCAATACTACAAGTTCCACCAACTAAAGTTAGTGGCGTGCAGAGTCTCATGCGCAGCCTTGCTTACAAGGGATTCTTTGAAATAGTAAGTGTCCATGAGGATAGGGAAGAGAAGGAAGCATATGCTCTAACTGTCACATCAGAGCTTCTTGTCAAAGGCAGTGACCTCTGTCTAGCACCGATGGTAGAGGGTTTTGTTGACCCAACTTTATCAGGTATTTGGTCTGACTTGAAGAAGTGGACTTATGAGGATGGTCTCACACTGTATGATGTCTCTCTAGGATCAAACCTGTGGGAATTTCTTGATAAAAATCCTGCATGTAACAAATTATTCAATGAAATAATGGCTAGTGACTCTCAGATGATGAACATGGCGTTGAGAGGTTGCAATTGGGTGTTTGAAGGAGTGGAGTCCATTGTGGATGTTGGTGGTGGAACTGGAATCACAGCCAAGGTTATCAGTGAGGCCTTCCCTAACATGAAATGCATTGTGTTGGAACGTCCAAGTGTTGTAGAAAACTTGCCAGAAACCAACAATTTGACCTATATTGGTGGGGACATGTTTAATTCTATTCCTAAGGCTGATGCAGTTCTTCTTAAGTTGATTTTACATAACTGGAGCGACAAGGATTGTAGGAAGATATTGGAAAATTGTAAAGAATCAATTTCTGATAAAGGTAAAAAGGGAAAAGTAATTGTGATAGATGTTGTGATAAACGAAAACGAAGATGAGCACGAACTTACTGAACTCAAACTTCTCATGGACGTAAGCATGGCATGTCTTATAAATGGAAAAGAGAGAAGAGAAGAAGAATGGAAGAAACTGTTCGAGGAAGCAGGGTTTCAAAGCTACAAAATATCTTCTTTGACAGGATATTTATCTCTTATTGAGATCTATCCTTAA 1077 0.3993 MASSNGRKASEIFQGQVHLYKYFFAHTIDAMSLKWIVELGIPDVIHNHGQPITLPKLVSILQVPPTKVSGVQSLMRSLAYKGFFEIVSVHEDREEKEAYALTVTSELLVKGSDLCLAPMVEGFVDPTLSGIWSDLKKWTYEDGLTLYDVSLGSNLWEFLDKNPACNKLFNEIMASDSQMMNMALRGCNWVFEGVESIVDVGGGTGITAKVISEAFPNMKCIVLERPSVVENLPETNNLTYIGGDMFNSIPKADAVLLKLILHNWSDKDCRKILENCKESISDKGKKGKVIVIDVVINENEDEHELTELKLLMDVSMACLINGKERREEEWKKLFEEAGFQSYKISSLTGYLSLIEIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01430 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Spst1g01430 358 Gene3D - 1 108 IPR036388 -
Spst1g01430 358 CDD AdoMet_MTases 197 296 - -
Spst1g01430 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Spst1g01430 358 PANTHER O-METHYLTRANSFERASE 14 343 IPR016461 GO:0008168
Spst1g01430 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 108 - -
Spst1g01430 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Spst1g01430 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Spst1g01430 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Spst1g01430 358 FunFam O-methyltransferase ZRP4 110 358 - -
Spst1g01430 358 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Spst1g01430 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01430 Spst-Chr1 17795174 17796747 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01430 91 358 Monolignol Biosynthesis Gene Families AT1G51990 32.472 4.43e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01430 K22588 - gmx:100811609 539.265