Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01428 ATGTGCTACCTAGCACACAAGGGATTCTTTGAGATAGTAAGAGTCCATGACAACAAAGAAGAACAGGAAGCATATGCTCTAACTGCTGCGTCAGAGCTTCTTGTCAAAGGCAGTGACCTTTGTCTAGTACCAATGGTAGAGTGCAATCTTGCCCCTGATTTTTTATGTGTGTGGCCTCAGTTAAAGAAGTGGACTTGTGAGGATAATCTCACCCTATTTGATGTCTCCATAGGATCAAATTTGTGGGAACTTCTCGGTAACCCTGCATATAACAAGTTATTCAATGTCGCAATGGCTAGTGATTCTCAGATGATGAACATGGCGTTGAGAGGTTGCAATTGGGTGTTTGAAGGAGTGGAGTCCATTGTGGATGTTGGTGGTGGAACCGGAATTACAGCTAAGACTATCTGTGAGGCATTTCCTAACATGAAATGCATCGTCTTGGATCTTCCTCGTGTTGTAGAAAACATGGCAGAAAGCAACAATTTGACATATGTTGGTGGGGACATGTTTAAATCTATTCCCAAGGCTGATGCAGTTCTTCTTAAGTGGATTTTACATAACTGGAATGACAAGGATTGTAAGAAGATATTAGAAAATTGTAAAGAAGCAATTTCTGATAAAGGTAAAAAGGGAAAAGTAATTGTGATAGATGTTGTGATTAACGAAAACGAAGGTGAGCACGAACTTACTGGACTGAAACTCCTCCTGGACGTAACCATGGCTTGTCTTATGAATGGAAAAGAGAGAAAGAGAAGATGA 762 0.4055 MCYLAHKGFFEIVRVHDNKEEQEAYALTAASELLVKGSDLCLVPMVECNLAPDFLCVWPQLKKWTCEDNLTLFDVSIGSNLWELLGNPAYNKLFNVAMASDSQMMNMALRGCNWVFEGVESIVDVGGGTGITAKTICEAFPNMKCIVLDLPRVVENMAESNNLTYVGGDMFKSIPKADAVLLKWILHNWNDKDCKKILENCKEAISDKGKKGKVIVIDVVINENEGEHELTGLKLLLDVTMACLMNGKERKRR 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01428 253 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 40 251 IPR029063 -
Spst1g01428 253 FunFam O-methyltransferase ZRP4 36 253 - -
Spst1g01428 253 Gene3D - 1 34 IPR036388 -
Spst1g01428 253 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 253 IPR016461 GO:0008168
Spst1g01428 253 CDD AdoMet_MTases 122 221 - -
Spst1g01428 253 PANTHER O-METHYLTRANSFERASE 1 251 IPR016461 GO:0008168
Spst1g01428 253 Gene3D Vaccinia Virus protein VP39 35 253 IPR029063 -
Spst1g01428 253 Pfam O-methyltransferase domain 58 252 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01428 Spst-Chr1 17726924 17727896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01428 58 253 Monolignol Biosynthesis Gene Families AT5G54160 36.364 2.50e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01428 K22588 - gmx:100811609 373.244