Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst1g01406 | ATGGATGGAGGAGTTGGACAAGATAGTGGTGCAGGCATGGAGATGTTTATAACAAATTATAAATTGGGAAAAACACTTGCCTTTGTATCCATGTTGGGCAAGAAGAAAATTGCAGAACATGTGTTCACTGGGAAGAAGGTTATCATCCACATCCTTAAACGTGGCAAGATAAAGAACATGGAAATGGAAGAACAAGAAATTGAAATTTTAAGATTGCTCAACCATCCTCGCATTATAAAACTTTACGAGGTCATAGAAACTCCAACTCACATATGTGTTGTTATGGAGCATGCATCTACAGAGCTTTTTGATTACATAATAGAGAGGGGTAGGGTAGAAGAAGATCAAGCTCGAAATTTTTTTCAGCAGATAATTTCTGGAGTGGAGCATTGTCACAGCAACATGGTGGTTCATAGAGATTTGAGACCTGAAAACATACTTCTGGACATCAAAGTCGGTGTCAAGATTTCTGGATTTGGCTTGAGCAACATCATGCATGCTGGTCACTTTCTGAACACAAGTTATGGAAGCTCTAACTATGTAGCTCCTGAGGTTATATGTGGAAAACTGTGTATTGGACCTGAAGTTGATGTATGGAGTTGTGGTGTAGTTTTATATTTTCTTCTCTGTGGAGTTCTACCTTTTGATGATGAAAATATTCCAAATCTCTTCAACAAAATAAAGGGAGGGGTTTTCAGTTTTCCATGTTACCTATCTGATGGAGCTAGAGACTTGATATCAAAGATGCTTAATAGTGCTCCTAAGGTTTGGCCGCAGAATGGATCAATGAGGCACATAGGGTTGCTTTTATGCTGGGTGTCTGGTGCTTCTTTTGGTAATTGTGGAACACAATGCCAGTTGTTTGAAATGGTGGAATTGATTATATGTCCACCTCAGGACTTCTACAGGAAAGTATTTTACAGGTCAATATTGGAGCTTGAGACCCTCATTAGCTGGGTGTGGGACATGAAGCTCCTATTTAAAGCTGATGCTCTATTCCCTAACATCCTGGGTTTCAAAAGTGCACTTTCCTCTATGTTAACTCGTATCATTATAGGGAATCAATTTGAAGTAGATGCTCTACTTCGTTCAGTGAGGTGTCTGCATTTTGTCACCTGTTGTCAGAAGGAGTTTCGACCCCGTAGCACCTTAAGGGTGTCCTTCACCTTTGGGAATTCAAATCCGTGTGCATTTGGCTCCATCATTGGTGGGATCTGGCAGATGCATGCGATGCAGCCTTACCCTCCCACAGTGCTGTGGTTGCCTCTTAAATTGGCTGCCATTGTGCTGCTTTTGTGGCAGAAACTGCATGGATTGTGGCAGGATAGAGTGTGTCAAGATTTAGAAATGGATGGACCAGCTGGTCGAGGTGGTGCTGGCCTGGACATGTTTCTACCAAATTATAAAATGGGAAAAACTCTTGGGATTGGATCTTTTGGCAAGGTGAAAATTGCAGAACATGTATTGACTGGTCATAAGGTTGCGATCAAGATCCTTAATCGACGCAAGATAAAGAGCATGGAAATGGAAGAAAAAGTGAGACGAGAAATTAAAATTTTAAGATTATTCATGCATCCTCACATTATACGACTATATGAAGTCATAGAAACTCCAACAGACATATATGTTGTTATGGAGTATGTGAAATCTGGAGAGCTCTTTGATTACATAGTTGAGAAGGGTAGGTTGCAGGAAGATGAAGCTCGTAATTTTTTTCAACAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTTCATAGAGATTTGAAGCCTGAGAATTTACTTTTGGACTCCAAATGTAATGTCAAGATTGCTGATTTTGGCTTGAGCAACATCATGCGTGATGGTCACTTTCTCAAGACCAGTTGTGGAAGCCCTAACTATGCTGCTCCTGAGGTTATCTCTGGGAAATTGTATGCTGGACCTGAAGTGGATGTCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAACCTCTTCAAGAAAATAAAGGGTGGGATATACACCCTTCCCAGTCATCTATCACCTGGTGCTAGGGATTTGATACCAGGGATGCTTGTGGTTGATCCTATGAGGAGAATGACCATACCTGAGATCCGTCAACACCCATGGTTTCAAGCTCGACTTCCGCGTTATTTAGCTGTGCCACCACCAGATACATTGCAACAAGCCAAAAAGATTGATGAGGAGATCCTTCAAGAAGTGGTGAAGATGGGATTTGACAGGAATCAATTGGTTGAATCTCTTCGGAACAGAATACAAAATGAGGGTACTGTGGCATACTATTTGTTATTGGACAACCGATTCCGTGTTTCAAGTGGCTATCTTGGAGCTGAGTTTCAAGAGTCCATGGATTCCAGTTTTAACCAAATGCATCCCAGTGAAGTTGCTTCTTCAGTTGTTGGACACCGATTTCCAGGCTATATGGATTATCCAGGTGTAGGGTCCAGGCCACAGTTCCCTGTCGAAAGAAAATGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCTCGCGAAATAATGACTGAGGTCCTTAAAGCTTTGCAAGAATTAAATGTTTGTTGGAAGAAGATTGGACATTACAACATGAAGTGCAGGTGGGTTGCTACCATTCCTGGTCGTCACGAAGGAATGGTTAACAATAATGTGCATAGTAACCATTATTTTGGAGATGATTCCAACATTATTGAGAACGATGCTGTTTCTACTTCAAACGTGGTCAAATTTGAAGTGCAGCTTTACAAAACTCGGGAAGAAAAGTATCTGCTTGATCTTCAAAGGGTACAGGGTCCACAGTTTCTTTTCTTGGATCTGTGTGCTGCTTTCCTTGCACAGCTTCGTGTCCTCTAG | 2892 | 0.416 | MDGGVGQDSGAGMEMFITNYKLGKTLAFVSMLGKKKIAEHVFTGKKVIIHILKRGKIKNMEMEEQEIEILRLLNHPRIIKLYEVIETPTHICVVMEHASTELFDYIIERGRVEEDQARNFFQQIISGVEHCHSNMVVHRDLRPENILLDIKVGVKISGFGLSNIMHAGHFLNTSYGSSNYVAPEVICGKLCIGPEVDVWSCGVVLYFLLCGVLPFDDENIPNLFNKIKGGVFSFPCYLSDGARDLISKMLNSAPKVWPQNGSMRHIGLLLCWVSGASFGNCGTQCQLFEMVELIICPPQDFYRKVFYRSILELETLISWVWDMKLLFKADALFPNILGFKSALSSMLTRIIIGNQFEVDALLRSVRCLHFVTCCQKEFRPRSTLRVSFTFGNSNPCAFGSIIGGIWQMHAMQPYPPTVLWLPLKLAAIVLLLWQKLHGLWQDRVCQDLEMDGPAGRGGAGLDMFLPNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKSMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPGMLVVDPMRRMTIPEIRQHPWFQARLPRYLAVPPPDTLQQAKKIDEEILQEVVKMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDSSFNQMHPSEVASSVVGHRFPGYMDYPGVGSRPQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVATIPGRHEGMVNNNVHSNHYFGDDSNIIENDAVSTSNVVKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL | 963 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst1g01406 | 963 | SMART | uba_6 | 743 | 780 | IPR015940 | - | |
| Spst1g01406 | 963 | CDD | AMPKA_C | 838 | 960 | - | - | |
| Spst1g01406 | 963 | ProSiteProfiles | Protein kinase domain profile. | 16 | 268 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Spst1g01406 | 963 | SUPERFAMILY | KA1-like | 777 | 962 | IPR028375 | - | |
| Spst1g01406 | 963 | FunFam | Non-specific serine/threonine protein kinase | 844 | 961 | - | - | |
| Spst1g01406 | 963 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 741 | 781 | IPR015940 | - | |
| Spst1g01406 | 963 | FunFam | Non-specific serine/threonine protein kinase | 459 | 798 | - | - | |
| Spst1g01406 | 963 | Pfam | Kinase associated domain 1 | 920 | 962 | IPR001772 | - | |
| Spst1g01406 | 963 | PANTHER | MAP/MICROTUBULE AFFINITY-REGULATING KINASE | 466 | 759 | - | - | |
| Spst1g01406 | 963 | SMART | tyrkin_6 | 468 | 720 | IPR020635 | GO:0004713|GO:0006468 |
Showing 1 to 10 of 29 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst1g01406 | K07198 | - | gmx:100796687 | 1016.14 |
Showing 1 to 1 of 1 entries