LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g01393	ATGTTGGAAGCCGTTCGGGCAAGGTGGCGACGCCAATGCTGGAAGAGAATACTAGGACGACCTCCTCTGGTTCTGCGACATCGGAAGATCGAGTCCGGACCCTTCGGCACCTTCGTCGGCGTCTACAACGGCCACGACGGTCCTGATTACTCGCGATACGTTTGCGATAACTTGTTCCGTAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCAACAAGCGTTTCGGCGGACTGAGGAGGGGTTCACGACGCTTGTTTCAAAGTTGTGGAACTCCCGACCACAGATTGCGACCACTGGGACATGTTGTGTGTTGGGGTGGAAAGGAGGAAGGACTTGGATTGAAACTGACATAAAAGTGGCTAAACCCTTGGTGCAAGGCTTGCAAATTATACACTTATGCGATGTCGATAAACGTGTGGAAAATGATCTTGAGCTTTTGCACAAGTTAGTTACAGAATATAAGGTGCCTGCCAGTTTAAGGTTTTCTTTATTGTCAAGACTGCGGTTTGCTAGGGCTTTTGGTTCTTTGGCTTCTAGACAGCAATATACATGCATTCGGTTGTATGCCTTCATAGTACTAATTCAAGCATGTGCTCGATGCGGATGA	630	0.4841	MLEAVRARWRRQCWKRILGRPPLVLRHRKIESGPFGTFVGVYNGHDGPDYSRYVCDNLFRNLQAILAESQSVVTSEAIQQAFRRTEEGFTTLVSKLWNSRPQIATTGTCCVLGWKGGRTWIETDIKVAKPLVQGLQIIHLCDVDKRVENDLELLHKLVTEYKVPASLRFSLLSRLRFARAFGSLASRQQYTCIRLYAFIVLIQACARCG	209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g01393	209	Gene3D	-	21	128	IPR036457	-
	Spst1g01393	209	SUPERFAMILY	PP2C-like	36	116	IPR036457	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g01393	Spst-Chr1	17430743	17431530	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g01393	29	113	PP2C-type Phosphatase Gene Family	AT3G17090	58.824	5.49e-32	116

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g01393	K01102		-	gmx:100814799	155.606