Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01330 ATGTCAGAAAAACTCGCATACAATCCTTCCTTGAACGTGCCTTTACTTCTCAATGATGAGGAGAAAGCCATAGTCTCTCATCCTTCTGCCGAAAACACTGTATCCTTCTTTGGCACCTGCCTTAATGGACTCAATACATTATCAGGTGTTGGGATACTCTCAGTTCCATATGCACTTTCTTCAGGAGGGTGGTTAAGCTTGACTCTTCTGTTTGTTATTGTCGCTGCTGCATTTTACACCAGCCTTTTGATTAAAAGATGCATGGATAAGAATTCCAACATTAGAACCTACTCTGATATGGGTGAACTTGCATTTGGAAAGACAGGAAGGCTAATAGTTCTAATTATATGTTTTCTCTTAACAACGGCGGGTAATGCATACATAGCTATTATTGGTTATATAATGTTTGGTGATGAGGTTGAATCACAAGTAACTTTAAATCTACCTTTGGACAAAATAAGTTCAAAAGTAATCATGTATATTATCTTGGTAAATCCCATATCCAAGTTTGCTCTGACGGCAACTCCAATCATGAATGCTTTAAAGCACTTGCTGCCAAGGACGTATAAAATTAGGGTTAAGAAGCTAGGAAAACAAG 598 0.3796 MSEKLAYNPSLNVPLLLNDEEKAIVSHPSAENTVSFFGTCLNGLNTLSGVGILSVPYALSSGGWLSLTLLFVIVAAAFYTSLLIKRCMDKNSNIRTYSDMGELAFGKTGRLIVLIICFLLTTAGNAYIAIIGYIMFGDEVESQVTLNLPLDKISSKVIMYIILVNPISKFALTATPIMNALKHLLPRTYKIRVKKLGKQ 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01330 199 Pfam Transmembrane amino acid transporter protein 34 118 IPR013057 -
Spst1g01330 199 PANTHER AMINO ACID TRANSPORTER 28 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01330 Spst-Chr1 16734532 16737493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01330 113 189 Amino Acid or Auxin Permease AAAP Family AT2G39130 42.857 1.66e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01330 K15015 - psom:113272588 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01330 1 16734532 16737493 Spst1g01330 1 16734532 16737493 ECH