Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01329 ATGGATGGTGGCCACTGCGACTTCAACCACAACCTCAACATTCCCCTCGTCGAAGACCAAACCCAACGATGGCAACGAAACCAAAACCCTGAAACAGATTCTACGAATGTTTACGGCACCACATCTTTTCTCAAAACTTGTTTCAATGGACTCAATACTTTGTCAGATTCTGTTCAAATGTCAGAAAAACATTCATACAATCCTTCCTTGAACGTGCCTTTACTTCTCAATGACGAGGAGAAAGCCATAGCCTCTCATCCCACTGCCAAAAATACTGTATCCTTCTTTGGCACCTGTCTTAATGGACTCAATACATTATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCTTCAGGAGGATGGTTAAGCTTGGCTTTTCTGTTTGCTATCGCCGGTGCTGCATTTTATACGGGCCTTTTGATTAAAAGATGCATGGATAAGAATTCCAACATTAGAACATATCCTGATATTGGTGAACTTGCATTTGGAAAGACAGGAAGATTAATAGTATCAGTGTCCATGTACACGGAACTTTATTTAGTTTCAATAGGATTTTTGATTCTTGAAGGTGATAACATGAGTAATATGTTTCCCATTAGGGAGATGCAGATAGCTGGCTTAGAACTCGGGGGAAAACAATTCTTTGTGATATTGGTTGCCCTTATCATTTTGCCTACATGTTGGTTGGATAACTTGAATTTACTTTCTTATGTATCTGCAACTGGAGTCTTTGCTTCTATTCTCATCATCCTATCAATATCATGGACTGTAACATTCGATGAGGTAGGACTTCATCAAAAGGGAACTTTTGTTAATTGGAGTGGAATTCCAACATCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTTCCAACCTTGTACAATTCCATGAAAAACAAACATCAATTTTCTAATGTTCTACTTGTATGTTTCCTCTTAACCACTGTGGGTTATGCATCCATGGCCATAATTGGTTATCGAATGTTTGGAGATGGGATTGAATCACAAGTAACATTAAACTTGCCATTGGACAAAGTCAGCTCAAAAGTAGCAATATACACTACCTTGGTCAATCCTATATCCAAGTTTGCTCTGATGGTAACACCGATTACAAATGCTTTAAAAGACTTGCTTCCAAGGACATACAAGAATAGACTGACTAGTATCTTAGTTAGCACGGTCTTGGTAATGAGCGCTACCATTATTGCCCTTCTTGTTCCTTTCTTTGGGTCTCTCATGTCCCTAGTTGGAGCCTTTCTAAGTGTGACAGCTTCTATTCTGCTTCCATGTTTGTGTTACTTTAAGATTTCGGGCACTTATAGGAAATTTGAATATGAGACTGCAGCCATAATAGTGATAATAATGACAGCTATAATAATGATAATATCTGGAACTTACATCTCTATCATGGAAATAGTCCAACATTTGTAA 1446 0.3852 MDGGHCDFNHNLNIPLVEDQTQRWQRNQNPETDSTNVYGTTSFLKTCFNGLNTLSDSVQMSEKHSYNPSLNVPLLLNDEEKAIASHPTAKNTVSFFGTCLNGLNTLSGVGILSVPYALASGGWLSLAFLFAIAGAAFYTGLLIKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNMSNMFPIREMQIAGLELGGKQFFVILVALIILPTCWLDNLNLLSYVSATGVFASILIILSISWTVTFDEVGLHQKGTFVNWSGIPTSVSLYAFCYCAHPVFPTLYNSMKNKHQFSNVLLVCFLLTTVGYASMAIIGYRMFGDGIESQVTLNLPLDKVSSKVAIYTTLVNPISKFALMVTPITNALKDLLPRTYKNRLTSILVSTVLVMSATIIALLVPFFGSLMSLVGAFLSVTASILLPCLCYFKISGTYRKFEYETAAIIVIIMTAIIMIISGTYISIMEIVQHL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01329 481 PANTHER OS05G0424000 PROTEIN-RELATED 102 466 - -
Spst1g01329 481 Pfam Transmembrane amino acid transporter protein 93 473 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01329 Spst-Chr1 16649262 16657236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01329 94 478 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.067 2.25e-163 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01329 K15015 - gmx:100794374 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01329 1 16649262 16657236 Spst1g01329 1 16649262 16657236 ECH