LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst1g01328	ATGTCAGAAAAACATTCATACAATCCTTCCTTGAACGTGCCTTTACTTCTCAATGACGAGGAGAAAGCCATAGCCTCTCATCCCACTGCCAAAAATACTGTATCCTTCTTTGGCACCTGTCTTAATGGACTCAATACATTATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCTTCAGGAGGATGGTTAAGCTTGGCTTTTCTGTTTGCTATCGCCGGTGCTGCATTTTATACGGGCCTTTTGATTAAAAGATGCATGGATAAGAATTCCAACATTAGAACATATCCTGATATTGGTGAACTTGCATTTGGAAAGACAGGAAGATTAATAGTATCAGTGTCCATGTACACGGAACTTTATTTAGTTTCAATAGGATTTTTGATTCTTGAAGGTGATAACATGAGTAATATGTTTCCCATTAGGGAGATGCAGATAGCTGGCTTAGAACTCGGGGGAAAACAATTCTTTGTGATATTGGTTGCCCTTATCATTTTGCCTACATGTTGGTTGGATAACTTGAATTTACTTTCTTATGTATCTGCAACTGGAGTCTTTGCTTCTATTCTCATCATCCTATCAATATCATGGACTGCAACATTCGATGAGGTAGGACTTCATCAAAAGGGAACTTTTGTTAATTGGAGTGGAATTCCAACATCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTTCCAACCTTGTACAATTCCATGAAAAACAAACATCAATTTTCTAATGTTCTACTTGTATGTTTCCTCTTAACCACTGTGGGTTATGCATCCATGGCCATAATTGGTTATCGAATGTTTGGAGATGGGATTGAATCACAAGTAACATTAAACTTGCCATTGGACAAAGTCAGCTCAAAAGTAGCAATATACACTACCTTGGTCAATCCTATATCCAAGTTTGCTCTGATGGTAACACCGATTACAAATGCTTTAAAAGACTTGCTTCCAAGGACATACAAGAATAGACTGACTAGTATCTTAGTTAGCACGGTCTTGGTAATGAGCGCTACCATTATTGCCCTTCTTGTTCCTTTCTTTGGGTCTCTCATGTCCCTAGTTGGAGCCTTTCTAAGTGTGACAGCTTCTATTCTGCTTCCATGTTTGTGTTACTTTAAGATTTCGGGCAATTATAGGAAATTTGAATATGAGACTGCAGCCATAATAGTGATAATAATGACAGCTATAATAATGATAATATCTGGAACTTACATCTCTATCATGGAAATAGTCCAACATTTGTAA	1269	0.3775	MSEKHSYNPSLNVPLLLNDEEKAIASHPTAKNTVSFFGTCLNGLNTLSGVGILSVPYALASGGWLSLAFLFAIAGAAFYTGLLIKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNMSNMFPIREMQIAGLELGGKQFFVILVALIILPTCWLDNLNLLSYVSATGVFASILIILSISWTATFDEVGLHQKGTFVNWSGIPTSVSLYAFCYCAHPVFPTLYNSMKNKHQFSNVLLVCFLLTTVGYASMAIIGYRMFGDGIESQVTLNLPLDKVSSKVAIYTTLVNPISKFALMVTPITNALKDLLPRTYKNRLTSILVSTVLVMSATIIALLVPFFGSLMSLVGAFLSVTASILLPCLCYFKISGNYRKFEYETAAIIVIIMTAIIMIISGTYISIMEIVQHL	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst1g01328	422	PANTHER	OS05G0424000 PROTEIN-RELATED	43	407	-	-
	Spst1g01328	422	Pfam	Transmembrane amino acid transporter protein	34	414	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst1g01328	Spst-Chr1	16604944	16606524	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst1g01328	20	419	Amino Acid or Auxin Permease AAAP Family	AT3G28960	57.606	4.22e-166	471

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst1g01328	K15015		-	gmx:100794374	674.47