Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01310 ATGAAAATCCACGAGCAATGCGTTGTTGCCCCTCCTCCATCAGCCACCCAAACATCCATCACTCTCACTTTCTTTGATTTATTTTGGCTCAGGCTCCGTCCATATGAGCTCACATTCTTCTATTCCCTCCCTCCTCCACACTCAGAGCCTTCTTTTTTCTTTGCCAACGTCGTTCCAAAGCTCAAAACCTCTCTCTCTCACACCCTCCATTACTTCCTCCCTCTCGCTGGAAACATCGTTTGGCCTTCCGATTCCCCAAAACCCATCGTCCAATTCACACCTGGTAATGGTGTTTCCGTGGTGGTTACTGAGTCCGATGCTGAATTCAATCACGAGATAGACTACTCACCCCGTGAAGCTGCACGCTCTCATCCTTTGGCACCCCACTTGCACTCGTCGGATTCTCTTGCTTCTGTTGTGTCTTTTCAGATCACTCTATTTCCTAACAAAGGATTCAGCATTAGCATGAGCATCAATCATGCTGTCCTTGATGGAAAATCTGCAGCTATGTTCATCAAGGCCTGGGCTTTTCTATGCCGAAGCCAGACCAACAATGAAACACAAATACCATCTTTGGTGCCAGAATTGGAGCCTTCCTTTGACAGAACCCTCATCAAAGAACCAGACTTCACCGAAACTTTGACAGGCTTCTTATTAAAAAGATTCCCTCAAGAAAACAGAGACCCGCGATGCTTGAAGATTATACCTTCCTCACCAGTACCTAAAGACGCGATTCGAGCCAAGTTCGTTCTCACACGACGGGATTTGGAGAAGATAAAGAGAAGGGTCTTGCTCAAGTGGGATGTAGTGGAAGAATCAAAATCAACCGTCTTTTCAAAGCCTCCTACTTTATCTTCCTTTGTTGTCACCTGTGCTTATGTGACAGTTTGCATTGCAAAAGCCGTGCATGGAATTGACAGGGAGAAACAAAAGTTTGCTTTTGAGTTCGCGGCTGATTGGAGGTCCAGGTTAGAGCCTCGACTCCCTGATAACTATTGTGGAAACTGTGTGTGGAACAGTTTGGTGAATGCAGATCCGTCAGACTATATTAAGGAAGAAGGGGTGGTGATTGTTGCTAAGCACATTCATAGAAAGGTAAAGATGTTAGAAAAGGGGGCAGCTTTTGAAAGGTTTTCTCAAATCATGGATTTGTTAAGGAAGGGGGATGTACAAATGATTGGAGCAGCAATGTCTAACCGATTTGGAGTTTATGATACTGATTTTGGTTGGGGAAAGCCCGCTAAGGTGGAGATGACATCGATGGAGCAAAATAAAACTCCACGCATTGGGTTGGCAGAGACCAAGGATGGGAGTGGTGGGGTTGAAGTTGAGCTGGTTATTATGAACAAACATGTGATGGATCTGTTTGCTACTTTGTTTCGTGAAGGACTGTGTGATGATGATTGA 1407 0.4513 MKIHEQCVVAPPPSATQTSITLTFFDLFWLRLRPYELTFFYSLPPPHSEPSFFFANVVPKLKTSLSHTLHYFLPLAGNIVWPSDSPKPIVQFTPGNGVSVVVTESDAEFNHEIDYSPREAARSHPLAPHLHSSDSLASVVSFQITLFPNKGFSISMSINHAVLDGKSAAMFIKAWAFLCRSQTNNETQIPSLVPELEPSFDRTLIKEPDFTETLTGFLLKRFPQENRDPRCLKIIPSSPVPKDAIRAKFVLTRRDLEKIKRRVLLKWDVVEESKSTVFSKPPTLSSFVVTCAYVTVCIAKAVHGIDREKQKFAFEFAADWRSRLEPRLPDNYCGNCVWNSLVNADPSDYIKEEGVVIVAKHIHRKVKMLEKGAAFERFSQIMDLLRKGDVQMIGAAMSNRFGVYDTDFGWGKPAKVEMTSMEQNKTPRIGLAETKDGSGGVEVELVIMNKHVMDLFATLFREGLCDDD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01310 468 Gene3D - 1 224 IPR023213 -
Spst1g01310 468 Gene3D - 240 465 IPR023213 -
Spst1g01310 468 PANTHER - 1 464 - -
Spst1g01310 468 Pfam Transferase family 4 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01310 Spst-Chr1 16033636 16035042 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01310 1 462 Monolignol Biosynthesis Gene Families AT5G48930 25.732 5.67e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01310 - - gmx:100815354 550.821