Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01304 TGTTTGGTGGGTGAGGAAATAAAATATCCCTCGCTGGGTGCGGTTCACTCGCAACTTCTTCTAATTCCACCGGGTTCTCTTGCCATAAGCGATCGTTTTTGTCCGTGGCTCCTTCCATTTGAGCTCACATTCTTCTATTCCCTCCCTCCTCCACACTCAGACCCTACTTTTTTCTTTGCCAATGTCGTTCCAAAGCTCAAAACCTCTCTCTCTCACACCCTCCATTACTTCCTCCCTCTCGCTGGAAACATCGTTTGGCCTTCCGATTCCCCAAAACCCATCGTCCAATTCACACCCGGTGACGCTGTTTCCGTGGTGGTTACTGAGTCCGATGCTGAATTCAATCACGAGATAAATTACTCACCCCGTGAAGCTGCACGGTCTCATCCTTTGGTACCCCACTTGCACTCGTCGGATTCTATTGCTTCTGTTATGTGTTTTCAGATCACTCTCTTTCCTAATAAAGGATTCAGCATAGGCATGAGCACTCAGCATGCCGTCCTTGATGGAAAATCTGCAGTTATGTTCATCAAGGCTTGGGCTTCTCTATGCCGTAGCCAAACCAACGATGATACACAAATACTACCTTTGGTGCCAGAGTTGCAGCCTTCCTTTGAAAGATCCCTCATCAAGGAACCAACACATGTGAGAGCTTACTTCAAACAAAAATGCGACGAGCGATGCTTGAGGAGTCGACCTTCCCCACCAGTAGCCAAAGATGCGGTTCGAGCCAAGTTCGTTCTCACGCGAGGGGATTTGGAGATAATAAAGAGAAGGATCTTGTCCAAGTGGGACCTGGTGGAAGAATCAAAATCTACCGTTTCTTCAAAGCCATCTACTTTATCATCCTTTGTTATCACCTGTGCTTATGTGACAGTTTGCATTGCAAAAGCCGTGCACGGAATTGACAGGGAGAAAAAAAAGTTTGCTTTTGGGTTCGCGGCTGATTGGAGGTTCAGGTTAGAGCCTCGAATCCCTGATAACTATTGTGGAAACTGTGTGTGGAACAGTTTGGTGAATGCAGAACCGTTAGACTATATAAAGAAAGAAGGGGTGGTGATTGTTGCTAAGCACATTCATAGAAAAGTAAAGATGTTGGACGAGGGGCCAGTTTTTGATGGATTGTCTCAAATCGTGGAATTTTTAAGGCAGGAGGATGTACAAATTATTGGAGTAACAATGTCTAACCGATTTGGAGTTTATGATACTGATTTTGGTTGGGGAAAGCCCGCTGAGGTGGAGATAACATCGTTGGATCGGAGTACATGTCCATGCATTGGGTTGGCAGAGAGCAAGGATGGGAGTGGTGGGGTTGAAGTTGAGCTGGTTATGAACAAACATGTGATGGATCTCTTTGCTACACTGTTTCGTCAAGGATTGTGTGATGATGATTGA 1395 0.4573 CLVGEEIKYPSLGAVHSQLLLIPPGSLAISDRFCPWLLPFELTFFYSLPPPHSDPTFFFANVVPKLKTSLSHTLHYFLPLAGNIVWPSDSPKPIVQFTPGDAVSVVVTESDAEFNHEINYSPREAARSHPLVPHLHSSDSIASVMCFQITLFPNKGFSIGMSTQHAVLDGKSAVMFIKAWASLCRSQTNDDTQILPLVPELQPSFERSLIKEPTHVRAYFKQKCDERCLRSRPSPPVAKDAVRAKFVLTRGDLEIIKRRILSKWDLVEESKSTVSSKPSTLSSFVITCAYVTVCIAKAVHGIDREKKKFAFGFAADWRFRLEPRIPDNYCGNCVWNSLVNAEPLDYIKKEGVVIVAKHIHRKVKMLDEGPVFDGLSQIVEFLRQEDVQIIGVTMSNRFGVYDTDFGWGKPAEVEITSLDRSTCPCIGLAESKDGSGGVEVELVMNKHVMDLFATLFRQGLCDDD 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01304 464 Gene3D - 237 461 IPR023213 -
Spst1g01304 464 Gene3D - 23 231 IPR023213 -
Spst1g01304 464 PANTHER - 34 460 - -
Spst1g01304 464 Pfam Transferase family 57 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01304 Spst-Chr1 15801198 15803685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01304 44 452 Monolignol Biosynthesis Gene Families AT5G48930 25.352 3.78e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01304 - - gmx:100815354 513.457