Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01302 ATGAAAATCCATGAGCAATGCGTTGTTGCCCCTCCTCCATCAGCAACCCAAACATCCATCACTCTCACTTTCTTTGATTTATTTTGGCTCAGGCTCCGTCCACTAGAGCTCACATTCTTCTATTCCCTCCCTCCTCCACACTCAGACCCTTCTTTTTTCTTTGCCAATGTCGTCCCAAAGCTCAAAACCTCTCTCTCTCACACCCTCCATTACTTCCTCCCTCTCGCTGGAAACATCGTTTGGCCTTCCGATTCCCCAAAACCCATCGTCCAATTCACACCTGGGGATGGTGTTTCCGTGGTGGTTACTGAGTCCGATGTGGAATTCAATCACGAGATAGACTACTCACCCCGTGAAGCTGCACGCTCTCATCCTTTTGTACCCCACTTGCACTCGTCGGATTCTCTTGCTTCTGTTGTGTCTTTTCAGATCACTCTCTTTCCTAACGAAGGATTCAGCATTGGCATGAGCATCAATCATGCAGTTCTTGATGGAAAATCTGCGGCTATGTTCATCAAGGCCTGGGCTTCTCTTTGCCAAAGCCAAACCAACGATGAAACACAAATACCATCTTTGGTGCCAGAATTGGAGCCTTCCTTTGACAGAACCCTCATCAAAGAACCAGATTTCACAGAAAATTTGACAGGCTTCTTATTAAACGCATTCCCTCAAGAAAACAGAGACCCTCGATGCTTGAAGATTATACCTTCCTCACCAGTACCTAAAGATGCGATTCGAGCCAAGTTCGTTCTCACAAGACGGGATCTGGAGAAGATAAAGAAAAGGGTCTTGTTCAAGTGGGATGTAGTGGAAGAATCAAAATCAACCGTCTCTTCAAAACCTGCTACTTTATCTTCCTTTGTTGTCACCTGTGCTTATGTGACAGTTTGCATTGCAAAAGCCGTGCACGGAGTTGACAGGGGGAAAAAAAAGTTTGCTTTTGGGTTCGCGGCTGATTGGAGGTTCAGGTTAGAGCCTCGAATCCCTGATAACTATTGTGGAAACTGTGTGTGGAACAATTTGGTGAATGCAGAACCGTTCGACTATATAAAGGAAGAAGGGGTGGTGATTGTTGCTAAGCACATTCATAGAAGAGTAAAGATGTTAGACAAGGGGGCAGCTTTTGAAAGGTTTTCTCAAATCATGGATTTGTCAAGGCAGGGGGATGTACAAATGATTGGAGCAAAAATGTCTAATCGATTTGGGGTATATGATACTGATTTTGGTTGGGGAAAGCCCGCTAAGGTGGAGATAACATCGTTGCAAGGAAATAAAACTCCAAACATTGGGTTGGCAGAGAGCAAGGATGGGAGTGGTGGGGTTGAAGTTGAGTTGGTTTTGAATAAACATGTGATGAATCTCTTTGCTACTCTGTTTCGTGAAGGATTGCGTGATGATGATTGA 1404 0.4473 MKIHEQCVVAPPPSATQTSITLTFFDLFWLRLRPLELTFFYSLPPPHSDPSFFFANVVPKLKTSLSHTLHYFLPLAGNIVWPSDSPKPIVQFTPGDGVSVVVTESDVEFNHEIDYSPREAARSHPFVPHLHSSDSLASVVSFQITLFPNEGFSIGMSINHAVLDGKSAAMFIKAWASLCQSQTNDETQIPSLVPELEPSFDRTLIKEPDFTENLTGFLLNAFPQENRDPRCLKIIPSSPVPKDAIRAKFVLTRRDLEKIKKRVLFKWDVVEESKSTVSSKPATLSSFVVTCAYVTVCIAKAVHGVDRGKKKFAFGFAADWRFRLEPRIPDNYCGNCVWNNLVNAEPFDYIKEEGVVIVAKHIHRRVKMLDKGAAFERFSQIMDLSRQGDVQMIGAKMSNRFGVYDTDFGWGKPAKVEITSLQGNKTPNIGLAESKDGSGGVEVELVLNKHVMNLFATLFREGLRDDD 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01302 467 Gene3D - 240 465 IPR023213 -
Spst1g01302 467 PANTHER - 1 464 - -
Spst1g01302 467 Gene3D - 1 222 IPR023213 -
Spst1g01302 467 Pfam Transferase family 5 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01302 Spst-Chr1 15778117 15779520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01302 1 461 Monolignol Biosynthesis Gene Families AT5G48930 25.364 1.06e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01302 - - gmx:100815354 550.051