Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01242 ATGGAAGTGACTGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTGTCTAGAAATCATCATGGGGAGGCATCCGGGGGATCTCGTTTCTTCATTGTTATCTTCATCTTCAGCAGCAATAACTCATAATTTGCTATTGATTGATGTGATGGACCAAAGACCAAATCATCCTCTTAAATCAGTTGTTGGGGACATCATTTTGGTTGCAAGCTTTGCATTTTCTTGCTTGAGGGAAAACCCAGGCTCTCGTCCTACCATGGATCAAGTGTCCAAAAGTCTTATGATGGGGAAATCACCTTTATCGGATCAGCTCCCCTTGATTAGACTTGGACAACTCCTCTAA 342 0.4181 MEVTEKCDVFSFGVLCLEIIMGRHPGDLVSSLLSSSSAAITHNLLLIDVMDQRPNHPLKSVVGDIILVASFAFSCLRENPGSRPTMDQVSKSLMMGKSPLSDQLPLIRLGQLL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01242 113 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Spst1g01242 113 PANTHER LEUCINE RICH REPEAT KINASE 2 1 98 - -
Spst1g01242 113 SUPERFAMILY Protein kinase-like (PK-like) 3 99 IPR011009 -
Spst1g01242 113 Pfam Protein tyrosine and serine/threonine kinase 2 93 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01242 Spst-Chr1 14699006 14699347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01242 2 89 Receptor kinase-like Gene Family AT5G49660 33.696 3.41e-09 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst1g01242 PK_Tyr_Ser-Thr 2.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01242 - - vra:106759489 189.889