Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01239 ATGCCCACCTCCGTTTTTCTCCTTCTTTCCTCATTTCTTCTTTTCGTTTTCTTGCTGGAAGCTGTTCATGGCAGCAAAAAGGCAAGCAAGCTTGTTTCGCTTATTGCTCATTCATTTAGCACTAATTTGTACCTGTTGATATTTGCTTCTGATGCTGCTGAGTTTCCCATCATTGATTTGCTTCTTCATCATCGAATCTCTGGTTTTGTTTACAGTGTTACATTGTGTACATGGGAGCACACTCTCATGGTTCCAACCCTACTTCTGTTGACCTCGAAATTGCTACGGATTCTCATTATGATTTACTTGGTTCAATCATGGAAAGGTATAAAATCATGGTTTATCGCTGAGGAGAAAGCAAAAGAAGCAATGATTTACTCATACAATAGACACATAAATGGCTTTGCTGCATTACTTGAGGAGGAAGAAGCAGCAGATATTGCAAAAAACCCTAACGTGGTGTCAGTGTTCTTGAGCAAAAAATATAAACTGCACACTACCCGCTCTTGGGAATTTCTTGGACTGCAGAGAAATGGTAAGAACTCTGCATGGCAAAAGGGAAGCTTTGGTGAAAATACAATCATTGCTAACATTGACACTGGTGTTTGGCCCGAATCACAGAGCTTCAATGATAAAGGTTATGGTCCCATTCCATCCAAATGGCGCGGTGGTAATGTTTGTCAAATTAACAAACTTCCACGCACCAAGACAAATCTATGCAACAGAAAGCTGATAGGAGCAAGATTCTTTAACAAAGCTTTCGAGGCATACAATGGCGAACTTGTTCCGGCGCTGCAAACAGCGCGTGACTTCATGGGGCATGGGACCCACACTCTATCAATCGCAGGGGGCAATTTCGTCCCAGGTGCAAGCGTATTCGCGGTGGGGAATGGCACCGCAAAGGGTGGGTCTCCGAGAGCACGAGTTGCAGCGTACAAAGTGTGTTGGTCTCTGACGGACCCAGAAGGTTGTTATGGCGCCGATGTGTTGGCTGCCATCGACCGAGCCATCGACGACGGTGTTGATGTGATAAATCTTTCAGTTGGTGGCAATTACGTTGTGAGCCCCGAGGGAATATTCACTGACGAGGTTTCGATTGGGGCCTTCCATGCAATTGCTAGAAACATAGTGGTGGTTGCCTCTGCAGGGAACGACGGAGCAACGCCTGGTTCTGTCGTCAATGTCGCTCCTTGGGTCTTCACTATTGCTGCCAGCACCATAGACAGAGATTTTACCAGCAATATAACCATTAACAACAACCAGCAATTCGAGGGAGCCAGTCTTTTTGTAAACTCACCGAATCAGGCATTTTCTCTGATCCTCTCCACTGATGCTAAACTTGCTAATGCAACATTTCGAGACGCTCAACTGTGTAGGCGTGGAACACTTGATCCTACAAAAGTAAAGGGCAAAATAGTGCGTTGTATTCGAGATGGGAAAATAAAATCAGTTGCTGAGGGCAATGAAGCTCTATCTGCAGGCGCACAGGGAATGTTTTTGGGCAATCAAAAGCGAAATGGAAAAACAACTTTTGGCGAGCCTCATGTTCTGTCCACTGTGGGCACCAGTGATGGCCATTCAGGGGGACAGAGTGATTTTTTCTTAACTGCAACAGACCCTATAAAATCAGGTGCTACCATAAGAATGTCCCCAGCAAAGACGTTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATGTGGCCGCACCCGGTGTGAACATACTTGCTGCCTATTCAGAATTCGCAAGTGCATCAAGCTTGCTGACAGACAAACGTCGTGGGTTTAAATTCAACGTATTGCAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGCTGGACTTCTCAAAACACGTCATCCTAGTTGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACAGCAACGACGCGTGACAACACAAACAGGCCAATACAGGATGCGTTTGCAAAAACACTGGCAACTCCCTTTGCTTATGGTTCAGGACATGTTCGACCTGACCTTGCCATAGATCCTGGCCTTGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCAACAACTCATTTCTGCACTCAATTTCAATAGAACTTTCATTTGTTCAGGCTCTCACAGCGTAACGGACTTGAACTACCCTTCAATCACGTTGCCAAATCTTGACTTAAAAGCCGTAACCATTACTCGCACGGTAACAAATGTTGGAACACCAAGCACGTACACAGCAAGTACCCAATTGCCTGGATATAACATTGTTGTTGTGCCAAATTCCTTGACTTTCAGTAAAATTGGTGAGAAAAAGGCATTCAAGGTTACTGTGCAGGCAAGCAGTGTGACTAAGCGGAGAACTTATCAATTTGGAGAATTGCGATGGACAGATGGAAAGCATATAGTGAGGAGTCCTATTACGGTAAAGCGCAAATGA 2502 0.4476 MPTSVFLLLSSFLLFVFLLEAVHGSKKASKLVSLIAHSFSTNLYLLIFASDAAEFPIIDLLLHHRISGFVYSVTLCTWEHTLMVPTLLLLTSKLLRILIMIYLVQSWKGIKSWFIAEEKAKEAMIYSYNRHINGFAALLEEEEAADIAKNPNVVSVFLSKKYKLHTTRSWEFLGLQRNGKNSAWQKGSFGENTIIANIDTGVWPESQSFNDKGYGPIPSKWRGGNVCQINKLPRTKTNLCNRKLIGARFFNKAFEAYNGELVPALQTARDFMGHGTHTLSIAGGNFVPGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDPEGCYGADVLAAIDRAIDDGVDVINLSVGGNYVVSPEGIFTDEVSIGAFHAIARNIVVVASAGNDGATPGSVVNVAPWVFTIAASTIDRDFTSNITINNNQQFEGASLFVNSPNQAFSLILSTDAKLANATFRDAQLCRRGTLDPTKVKGKIVRCIRDGKIKSVAEGNEALSAGAQGMFLGNQKRNGKTTFGEPHVLSTVGTSDGHSGGQSDFFLTATDPIKSGATIRMSPAKTLFGRKPAPVMASFSSRGPNKIQPSILKPDVAAPGVNILAAYSEFASASSLLTDKRRGFKFNVLQGTSMSCPHVAGIAGLLKTRHPSWSPAAIKSAIMTTATTRDNTNRPIQDAFAKTLATPFAYGSGHVRPDLAIDPGLVYDLGLTDYLNFLCASGYDQQLISALNFNRTFICSGSHSVTDLNYPSITLPNLDLKAVTITRTVTNVGTPSTYTASTQLPGYNIVVVPNSLTFSKIGEKKAFKVTVQASSVTKRRTYQFGELRWTDGKHIVRSPITVKRK 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01239 833 ProSitePatterns Serine proteases, subtilase family, serine active site. 619 629 IPR023828 -
Spst1g01239 833 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 91 165 IPR037045 -
Spst1g01239 833 Gene3D Peptidase S8/S53 domain 193 702 IPR036852 GO:0004252|GO:0006508
Spst1g01239 833 Gene3D - 408 556 - -
Spst1g01239 833 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 119 830 IPR045051 -
Spst1g01239 833 ProSiteProfiles Serine proteases, subtilase domain profile. 169 689 - -
Spst1g01239 833 Pfam Subtilase family 190 659 IPR000209 GO:0006508|GO:0008236
Spst1g01239 833 Gene3D - 706 832 - -
Spst1g01239 833 CDD PA_subtilisin_like 414 526 - -
Spst1g01239 833 PRINTS Subtilisin serine protease family (S8) signature 618 634 IPR015500 -
Spst1g01239 833 PRINTS Subtilisin serine protease family (S8) signature 270 283 IPR015500 -
Spst1g01239 833 PRINTS Subtilisin serine protease family (S8) signature 190 209 IPR015500 -
Spst1g01239 833 CDD Peptidases_S8_3 162 655 IPR034197 -
Spst1g01239 833 Pfam Fibronectin type-III domain 735 830 IPR041469 -
Spst1g01239 833 FunFam Subtilisin-like protease SBT1.5 192 421 - -
Spst1g01239 833 Pfam Peptidase inhibitor I9 118 165 IPR010259 -
Spst1g01239 833 SUPERFAMILY Subtilisin-like 164 693 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01239 Spst-Chr1 14600854 14606184 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01239 116 831 Subtilisin-like Serine Gene Family AT2G04160 52.835 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01239 - - gmx:100813564 1187.94