Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01237 ATGCTCTCATTGATCAGGTCTAATGTGAAGAAAGTGTTTTATCTGGTTGTTGGCCTTAAGCCACTGATTTTGTGCTACATTGTGTACTTGGGAGCACATTCTCATGGTCCAAACCCTTCATTTTTTTACCTTGAAACTGCCACACATTTTCATTATGATTTACTGGGTTCGATCTTGGGAAGCCACGAAAAGGCTAAAGAAGCAATTATTTATTCATATAACAAACACATCAATGGCTTTGCAGCTGCACTTGAAGAGGAAGAAGCAGCAGATATTGCAAGTGAGAAAATCAATTTGACGCACAATGTTTCTACTGATGCAGAAAACCAAAACGTGGTATCTGTGTTTTTGAGCAAAGAGCATAAACTGCACACTACCCGTTCATGGGAGTTTCTTGGACTGCAAAGAAATGGTACCAACTCAGCATGGCAAAGGGGAAGATTTGGTGAGAATACAATCATCGCTAACATTGACACAGGTGTTTGGCCTGAATCTAAGAGTTTTACTGACAACGGATTAGGTCCTGTCCCTGCAAAATGGCGTGGGGGCAATGTCTGTCAAATTAATAAACTTCGGGGTTTAAACAAAGTTCCTTGTAACAGGAAACTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAAGCATTCAACGGTGAACTTCCCCGATCACAACAAACAGCACGTGACTTTGTGGGGCATGGCACGCATACCCTATCAACAGCTGGAGGCAATTTTGTCCCAGGTGCGAGTGTATTTGGCAATGGCAATGGCACTGCAAAGGGTGGATCCCCAAGAGCTCGAGTTGCAGCATACAAAGCGTGTTGGTCTCTCACTGATGCAGCTAGTTGTTTTGGTGCGGATGTGTTAGCTGCTATTGACCAAGCCATAAGTGATGGTGTTGATGTTATCTCTGTCTCTGTTGGAGGCCGAACTAGTCTCAGTGCTGAAGAAATATTCACAGATGAGGTTTCCATTGGAGCATTCCATGCACTTGGGAAAAATATTCTTGTTGTTGCCTCTGCGGGGAACGATGGACCTACACCTGGAACTGTTATCAATGTGGCTCCTTGGCTATTCACAATTGCAGCTAGCACACTAGATAGGGACTTCAGCAGTACCTTAACTTTCGGAAACAATCAGCAAATTACGGGAGCCAGTCTTTTTGTAAACATACCACCAAACCAGTCCTTTTCTCTAATCCTTGCTACTGATGCTAAATTTGCCAATGCATCAAATCGAGACGCTCAACTTTGTAAGGCTGGGACACTGGATCCTAGAAAAGTAAACGGCAAAATAGTGTCATGCATTCGAGATGGAAAAATAAAATCAGTTGCTGAGGGTAATGAAGCTCTATCTGCAGGAGCCAAGGGAATGATTTTGGGCAATCAAAAGCAAAATGGGAACACACTTCTTGCCGAGCCTCATGTTCTGTCCACTGTCAACTATCCTTCAGGCCATACAAAAACAACACCTGGTTTTGACATAACTGCCACGGACGATACAATAAACTCGAATACGACAATAAGGATGTCTTCAGCAAGAACATTGCTAGGAAGAAGGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATAAGATTCAGCCATCAATACTCAAGCCGGATGTAACTGCACCTGGTGTGAACATACTTGCTGCTTATTCACTATTCGCAAGTGCTTCTAACTTGCCATCAGACACACGTAGGGGGTTTCCATTCAATGTATTGCAAGGCACTTCTATGTCTTGCCCTCATGTTGCTGGCATTGCTGGACTCATCAAAACACTTCATCCTGATTGGAGTCCAGCTGCTATTAAATCAGCAATTATGACAACAGCAAGCACAAGAGATAACACCAACAGCCCAATACGGGATGCGTTTGATAAAAAATTGGCAAACCCTTTTGCTTATGGTTCAGGACATGTGCAACCAAACTCTGCAATAGATCCTGGACTTGTTTATGATCTAAGCCTTGTCGATTACTTGAACTTCCTATGTGCTTCCGGATACGACCAACAACTCATTTCAGCACTCAATTTCAACAGAACATTCATTTGTTCAGGATCTCAGAGCATAACAGACTTGAACTACCCTTCAATCACATTACCAAATCTAGGGTTAAATGCAGTAACTGTCACTCGCACCGTCACCAATGTTGGGCCACCAAGCACATATTTTGCAAAAGCTAAATTACCTGGATATACCATAGCTGTTGTACCCAATTCCTTGAGTTTCACAAAAGTTGGTGAAAAGAAGAGATTCAAGATTATTGTACAGGCTACAAGTGTAACTAAGAGGGGAAATTATAATTTTGGGGAATTGCTTTGGACAAATAGAAAGCACATAGTCAGAAGTCCTATAACAGTTCGGCTGCGCAAATGA 2388 0.4259 MLSLIRSNVKKVFYLVVGLKPLILCYIVYLGAHSHGPNPSFFYLETATHFHYDLLGSILGSHEKAKEAIIYSYNKHINGFAAALEEEEAADIASEKINLTHNVSTDAENQNVVSVFLSKEHKLHTTRSWEFLGLQRNGTNSAWQRGRFGENTIIANIDTGVWPESKSFTDNGLGPVPAKWRGGNVCQINKLRGLNKVPCNRKLIGARFFNKAYEAFNGELPRSQQTARDFVGHGTHTLSTAGGNFVPGASVFGNGNGTAKGGSPRARVAAYKACWSLTDAASCFGADVLAAIDQAISDGVDVISVSVGGRTSLSAEEIFTDEVSIGAFHALGKNILVVASAGNDGPTPGTVINVAPWLFTIAASTLDRDFSSTLTFGNNQQITGASLFVNIPPNQSFSLILATDAKFANASNRDAQLCKAGTLDPRKVNGKIVSCIRDGKIKSVAEGNEALSAGAKGMILGNQKQNGNTLLAEPHVLSTVNYPSGHTKTTPGFDITATDDTINSNTTIRMSSARTLLGRRPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLPSDTRRGFPFNVLQGTSMSCPHVAGIAGLIKTLHPDWSPAAIKSAIMTTASTRDNTNSPIRDAFDKKLANPFAYGSGHVQPNSAIDPGLVYDLSLVDYLNFLCASGYDQQLISALNFNRTFICSGSQSITDLNYPSITLPNLGLNAVTVTRTVTNVGPPSTYFAKAKLPGYTIAVVPNSLSFTKVGEKKRFKIIVQATSVTKRGNYNFGELLWTNRKHIVRSPITVRLRK 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01237 795 ProSitePatterns Serine proteases, subtilase family, serine active site. 580 590 IPR023828 -
Spst1g01237 795 Gene3D Peptidase S8/S53 domain 152 663 IPR036852 GO:0004252|GO:0006508
Spst1g01237 795 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 124 IPR037045 -
Spst1g01237 795 Gene3D - 367 517 - -
Spst1g01237 795 SUPERFAMILY Subtilisin-like 123 654 IPR036852 GO:0004252|GO:0006508
Spst1g01237 795 FunFam Subtilisin-like protease SBT1.5 151 378 - -
Spst1g01237 795 ProSiteProfiles Serine proteases, subtilase domain profile. 128 650 - -
Spst1g01237 795 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Spst1g01237 795 PRINTS Subtilisin serine protease family (S8) signature 579 595 IPR015500 -
Spst1g01237 795 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Spst1g01237 795 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 791 IPR045051 -
Spst1g01237 795 Gene3D - 667 793 - -
Spst1g01237 795 CDD PA_subtilisin_like 373 487 - -
Spst1g01237 795 CDD Peptidases_S8_3 121 616 IPR034197 -
Spst1g01237 795 Pfam Fibronectin type-III domain 696 791 IPR041469 -
Spst1g01237 795 Pfam Peptidase inhibitor I9 26 95 IPR010259 -
Spst1g01237 795 Pfam Subtilase family 149 622 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01237 Spst-Chr1 14587651 14595311 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01237 26 793 Subtilisin-like Serine Gene Family AT2G04160 52.584 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01237 - - gmx:100803751 1333.93