Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01233 ATGGAAGGAGAGAGAGGTGGTGCTCCCAATTATGAGCTTCAAGTTTCTTTCACCAACAACCCACAAGCCATACACGAATTGGGCTTTGTTCAGTATGAAGAAAACCAGGTCCTTGGCTTCTTGTCACCCTCTTCTCAATCTCAATCTTCTCACCTCTCCCAGTCCTTAAACAGTGATGTAGTTGTTACTACTACCGCTACAACTGCTGCAACCATCGGATTCATGAATCATAGTGAAATTGTCACCAAAACTTGGAATAACGACCAGGTAGGAACTCTGGATCCAAAGGCTGTAGATGAAGAGAACTGCACTGGAAATGCCAGTGAAGGCAACAATAACGCTTGGTGGAGGAGCTCAGCTACAGAGAAAAACAAGGTGAAGATAAGGAGGAAGCTAAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCCAGAAGTTATTATCGTTGCACCCACAACAACTGTAGGGTGAAGAAGAGGGTTGAACGACTCTCAGAGGATTGTCGTATGGTGATAACCACCTATGAAGGTAGACACAATCACTCTCCTTGCGACGACTCAAATTCGGAGCATGAATGCTTTACCTCTTTCTAG 666 0.4414 MEGERGGAPNYELQVSFTNNPQAIHELGFVQYEENQVLGFLSPSSQSQSSHLSQSLNSDVVVTTTATTAATIGFMNHSEIVTKTWNNDQVGTLDPKAVDEENCTGNASEGNNNAWWRSSATEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSEHECFTSF 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01233 221 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01233 221 ProSiteProfiles WRKY domain profile. 143 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01233 221 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 44 208 IPR044810 GO:0003700
Spst1g01233 221 FunFam WRKY transcription factor 57 134 208 - -
Spst1g01233 221 SUPERFAMILY WRKY DNA-binding domain 140 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01233 221 Gene3D WRKY domain 134 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01233 221 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01233 Spst-Chr1 14555605 14562765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01233 3 221 WRKY Transcription Factor Family AT2G44745 58.150 3.12e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst1g01233 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01233 - - gmx:100170677 395.201