Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01208 ATGTCTGTTCCTATTGTTCTTGTAATGTCTGAACGTTTAGTACCCGGATTTGAAGCCACCATCATCTCCAACTCCATCAAAGCCACAATAGTTTTGATGGTTATAGCATACTCAACCGACATCTCCTCAGCACAATCCTTGTTCTTCAACAGAAGGATCCTCCATGAACCCTTCATTCCTTTAACCTCTCTTCCTCCTTCACAACCACCACAACCACCACCTCCTCATCCTTCTCCTTCAACCCCAAAACGAAAACCCAAATACCCTTCATCATCCACCATCCCCACCACTACTGTTACCACAACACCAACATCTACAACACCAACAACAGAAACATCAACAGAATCACCATTTTTCCCATTATACCCCTCTTCCCCTCCTCCTCCTTCTCCGATCACCTTTGCCTCCTTTCCAGCCAACATTTCCTCTCTCGTTCTCCCTCACTCCCCCAAACCCAATTCCTCCCCCAACAAACTCCTCCCCGTCGCTCTCTCTGCCGTCGTCGCCGCCGCACTCGTCATCGCTATCTCCGCCTTCGTCTGTTACCGCCGCCGCCGAAACCCTCCCCCCTCCCCAGCAGGTAAAATTCTCCGTTCCGGCACCGACCTCCGCCCACTCCGCCGCAATGCCAAAACTTCCATCGAAGCGCGGAAGCTCCGGCACACGTCCTCCACCAGCTCCGAGTTTCTCTACCTCGGCACCGTCGTGAACTCTCACATAATCGAGGACGCGGACGTCTCCAACGTCGGGGAAGATGACCGGAAAATGGAATCGCCGGAGCTCAGGCCGCTTCCACCGCTAGCCCGACAAGCGTCAGTGCCGCCACCTCCTCCACCCCGCGATGAGGCGGGTTTCACTACCGCGGAGGAGGACGAAGACGAGTTTTACTCCCCGAGAGGTTCGTCGTTGGGAGGCTCCGGAGGAACCGGAACGGGTTCCCGGCGAGTGTTCACCTCCGGAAGAAGCGTGACCTCTACATCGTGCTCTTCGTCTTCTTCTGGCTCGCCGGAAAGGTCTATGTCGAACTCGCCGCTGCCGACGGGTTCGAAAGCACTGTCGCCGGAAAATTACAACCACCAGCACGTGCATCCCTCTTCTTCGATGTGCCCAACACCAGATAGTGTTTTCGCCGAACATGATAACGATTCGTTAAGTGCATGTGCACGTACACATGCACATGCAGCACCGTCATCATTACATGAAGGAACATTGGAGAAAAATGAAAATGCATTATCTTCATCGCCACCACCGAGACTATCTAATGCTTCTTCGTCTTCGGCTTTTTCTCTTCCCTCTTCGCCGGAGAAGGTGACACGTCATCACACTTTCGATCAGTCCCCGAGAATGTCGAGTGTCTCCGACGGACTAATGTTACCTGGATTGTCATCGTTGCCTTTGTCACCCGCCCTGCTTTCATCGCCGGAAACCGAAAGAGGAACTTTCAGTGAATTGGGAAGAGGTTCTTTTGGTGCGCACAGAAAAAACTGGAGCATCCCAGTACTGTCAATGCCAATAACAACACCCTTTGATGAAATTGGAACTGTTCCAGCTCCTCCACCTTTGCCACTGAGGAAGCACTGGGAAATTCCAAGCCCTGCTCCCCCACCACCTCCGCCATTACCTCGACAGAGGAAACAGTGGGGAGTTCCAGCGCCGGGGCCGTCAACACCGATTGGTCAACCGGTTTCAAGACCACCGGAATTGTTGCCTCCTTCTAGGCCTTTTGTCTTGCAAAACCAAGCAACCAGTGCTGAGTTGCTGGCAAGTTTGGGTGAAATTGAAGAGACCGGTAAACCGAAATTGAAGCCCCTGCATTGGGACAAAGTGAGAACAAGCTCTGATCGCGAAATGGTGTGGGATCAGATGAAGTCCAGTTCGTTTAAATTGAATGAGAAAATGATTGAAACGTTGTTTGTTGTGAACACACCAAACCCAAAGCCCAAGGATGCAACCACAAACTCTGTTTCTCACCCGCCAAATCAGGAGGAAAGAATACTCGATCCTAAAAAGTCGCAAAATATTTCAATCTTGCTGAAAGCGCTTAATGTCACAATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTACTGATTCACTTGGAACAGAATTACTTGAAAGTTTATTAAGAATGGCACCAAGCAAGGAAGAAGAACGTAAGTTGAGGGAATATAAAGAAGACTCACCAGCCAAGCTTGGTCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGATTGAAGCAATGCTTTACATAGCCAGTTTCGAGTCTGAAGTGGAGTATCTCCAGACATCCTTTCAAACAATAGAGGCTGCCTGTGAGGAGCTACGACATTGTAGAATGTTCTTGAAGCTTCTGGAGGCTGTATTGAAAACTGGGAACCGCATGAATGTGGGAACGAACCGTGGCGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCTGATGTGAAAGGCGCAGATGGCAAAACCACTCTTCTGCATTTTGTTGTACAAGAAATTATTCGAACCGAAGGTGCTCGGCTCTCTGACATTAATCAAACTCCAAGCTCTACTTCGAGCGAAGATGCCAAGTGTAGGAAGCTTGGCCTACAAGTTGTATCAAGCCTGAGTTCAGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCCGATGTTCTCAGCAGTGATGTGTTAAAAGTTTCCAAAGGAATTGCAAACATATCAGAAGTTGTGCAGTTAAACCAAACCACAGGATCAGATGAAAGTAATCAGAATTTCACAGAATCAATGAACAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTGTCTCCTCCCTTGTGAAGGAGATTACAGAGTATTTTCATGGGAACTTGGCAAAGGAAGAAGCTCATCCATTTAGACTCTTCATGGTTGTAAGAGACTTTCTTGCAGTTCTTGACCGTGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACCACGGTTAGTTCAGCCCATAAATTCCCAGTGCCAGTTAACCCAATGCTTCCACAATCCCTTCCTGGATTACACGAGAAGCAGCAATATAATAATAGCTCTTCAGATGATGAAACTCAACCTTAG 3135 0.4833 MSVPIVLVMSERLVPGFEATIISNSIKATIVLMVIAYSTDISSAQSLFFNRRILHEPFIPLTSLPPSQPPQPPPPHPSPSTPKRKPKYPSSSTIPTTTVTTTPTSTTPTTETSTESPFFPLYPSSPPPPSPITFASFPANISSLVLPHSPKPNSSPNKLLPVALSAVVAAALVIAISAFVCYRRRRNPPPSPAGKILRSGTDLRPLRRNAKTSIEARKLRHTSSTSSEFLYLGTVVNSHIIEDADVSNVGEDDRKMESPELRPLPPLARQASVPPPPPPRDEAGFTTAEEDEDEFYSPRGSSLGGSGGTGTGSRRVFTSGRSVTSTSCSSSSSGSPERSMSNSPLPTGSKALSPENYNHQHVHPSSSMCPTPDSVFAEHDNDSLSACARTHAHAAPSSLHEGTLEKNENALSSSPPPRLSNASSSSAFSLPSSPEKVTRHHTFDQSPRMSSVSDGLMLPGLSSLPLSPALLSSPETERGTFSELGRGSFGAHRKNWSIPVLSMPITTPFDEIGTVPAPPPLPLRKHWEIPSPAPPPPPPLPRQRKQWGVPAPGPSTPIGQPVSRPPELLPPSRPFVLQNQATSAELLASLGEIEETGKPKLKPLHWDKVRTSSDREMVWDQMKSSSFKLNEKMIETLFVVNTPNPKPKDATTNSVSHPPNQEERILDPKKSQNISILLKALNVTIEEVCEALLEGSTDSLGTELLESLLRMAPSKEEERKLREYKEDSPAKLGLAEKFLKAVLDVPFAFKRIEAMLYIASFESEVEYLQTSFQTIEAACEELRHCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSDINQTPSSTSSEDAKCRKLGLQVVSSLSSELANVKKAAAMDSDVLSSDVLKVSKGIANISEVVQLNQTTGSDESNQNFTESMNKFIRMAEEEIPKIQAQESVVSSLVKEITEYFHGNLAKEEAHPFRLFMVVRDFLAVLDRVCKEVGMINERTTVSSAHKFPVPVNPMLPQSLPGLHEKQQYNNSSSDDETQP 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01208 1044 MobiDBLite consensus disorder prediction 302 372 - -
Spst1g01208 1044 ProSiteProfiles Formin homology-2 (FH2) domain profile. 591 1016 IPR015425 -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 62 84 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 1027 1044 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 247 451 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 641 663 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 523 563 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 645 660 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 60 122 - -
Spst1g01208 1044 PANTHER FORMIN-RELATED 128 1038 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst1g01208 1044 MobiDBLite consensus disorder prediction 523 545 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 402 436 - -
Spst1g01208 1044 Gene3D Formin, FH2 domain 593 999 IPR042201 -
Spst1g01208 1044 SMART it6_source 591 1005 IPR015425 -
Spst1g01208 1044 Pfam Formin Homology 2 Domain 595 990 IPR015425 -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 1011 1044 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 268 282 - -
Spst1g01208 1044 SUPERFAMILY Formin homology 2 domain (FH2 domain) 604 1002 - -
Spst1g01208 1044 MobiDBLite consensus disorder prediction 85 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01208 Spst-Chr1 14363404 14370701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01208 538 1032 FH2 protein (formin) Gene Family AT3G25500 69.109 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01208 - - vun:114185313 1425.99