Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01183 ATGGTGATGATTGAATGGGAGAGGTTGAGGATACTGGGAGAGGGATCCTACAGCATAGTGTACCTAGCCGAGCTTAGAATCCCAGAAGAAGGAAAAAGAATGGTGATAGCCATGAAGAGTTCAAAGCCTCATGGATTACATTCGTTGCAGAAAGAAGGAGGCATATTGGAATCGTTCTCTGGGAGTAAAGAAATTGTTGAATGCATGTGGAGCATAACGAACGAGGAGAATGGTTGTGCTGTGTGCCATCTTCTCATGGAGTTGGCCCCTTACGGTTGTCTTGGAGACTTGATCAGAAGGAAACCATTCTCGGAGAGCCAAGTCATAGTCTCCACACGCATGATTCTCAAAGGCCTCTCTCTCATCCATAAAGCTGGGGTCGTTCATTGTGATCTGAAGCCAGACAACCTCCTTCTTTTTCCCCCACTTGAAGAAGGTGTGGAGTTTCAACTCAAGATTGCTGATTTCGGACTTGCCAAGACCAAAGAAGATAAATGCGACGGTGAGAGTCGGGAGATGAAGTTCAGAGGTTCACCCTTTTACATGTCGCCAGAATCAGTGAGGGGCGAAATTGAAACAGCGTTGGATATATGGTCTCTTGGGTGCATAATCATCGAGATGATGACAGGGTTACCTGCATGGCACCACATTTCTTCCACACGCCACTTAATGTTCATACTCGCATTCCCTAAACAATCACCGCCGATACCTTCTTGGCTCAGTCTCTGTTGCCAAGATTTCTTGAGCAAGTGTTTCTCGAAGGATCCCAATCAGAGATGGACGGCCACCATGCTTCAACGTCATCCTTTTCTTCTCTGA 819 0.4652 MVMIEWERLRILGEGSYSIVYLAELRIPEEGKRMVIAMKSSKPHGLHSLQKEGGILESFSGSKEIVECMWSITNEENGCAVCHLLMELAPYGCLGDLIRRKPFSESQVIVSTRMILKGLSLIHKAGVVHCDLKPDNLLLFPPLEEGVEFQLKIADFGLAKTKEDKCDGESREMKFRGSPFYMSPESVRGEIETALDIWSLGCIIIEMMTGLPAWHHISSTRHLMFILAFPKQSPPIPSWLSLCCQDFLSKCFSKDPNQRWTATMLQRHPFLL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01183 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Spst1g01183 272 ProSiteProfiles Protein kinase domain profile. 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01183 272 SUPERFAMILY Protein kinase-like (PK-like) 6 271 IPR011009 -
Spst1g01183 272 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 271 - -
Spst1g01183 272 Pfam Protein kinase domain 7 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01183 272 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Spst1g01183 272 Gene3D Transferase(Phosphotransferase) domain 1 2 272 - -
Spst1g01183 272 SMART serkin_6 6 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01183 Spst-Chr1 14122767 14123585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01183 4 271 MAP Kinase Kinase Kinase AT2G32510 39.416 2.25e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst1g01183 Pkinase 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01183 - - gmx:102667952 362.844