Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01169 ATGTGGGTTACCTTCAAAATACCAACTTTCAGGACAGGGGTTGTGACGGATCCTTCAAGGGAAGAGAGTGGGTGTTCGAGTGGTGTGGAGTGCATCCTTGGCATTCTAAGGGCCCTTAAAATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCATCCCACTTCACCCTCTTCATCTCTCAGGAAGCGCAAGAACAGCTCCAAGAAGAGGCTTGGATCAAGAGCTTCTTCCTTTGAGTATTGGAGGAATGAGCCTCTTCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCTTCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAGAAGGGTACCAACCAGGATGCCATGGTTGTTTGGGAGAACTTTTGTTATAGACAAGATACTATTTTCTGTGGAGTTTTTGATGGCCATGGTCCATTTGGTCACATGGTTGCAAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCCAATGGGAACTTCATGTTTCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATACTGCAGCAGGCATGAATTTAGAAGAGGCTGTCTTTGCATCTGCTGATGAGGATTCCCGGGTATCTGTTGATGCTGTAGAAACAGAAAAACACCCAGAAATCTTTCAGACACTTAAGGAATCCTTTTTGAAAGCATTCAAAGTTATGGATAGGGAACTGAAGACCCACCAAAGTATTGATTGTTTTTGTAGCGGAACAACAGCAGTAACTCTGATTAAACAGGGCCATGATCTTATCGTTGGAAATGTTGGTGACTCTAGAGCTGTGTTGGGTACAAGAGACAACGATGATTCTCTTGTTGCTGTCCAGTTAACTGTGGATCTGAAACCCAATCTTCCAGCCGAAGAAGAGAGAATTCGCAAATGTAGAGGCCGCGTTTTTGCACTTCAGGATGAACCTGAAGTAGCTCGAGTCTGGTTGCCAAACAATGACTCACCTGGCCTTGCCATGGCCAGGGCATTTGGTGATTTTTGTCTTAAAGATTTTGGCTTGATATCTGTCCCAGAGATGTCATACAGACGACTCACCGAAAAAGATGAATTCATTGTCTTGGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATAGTGGCAGCCACATCAAGGCGTTCGTCTGCGGCACGAGCACTGGTCGAGTCAGCAGTTCGTGCATGGAGGTACAAGTATCCAACCTCCAAAGTTGATGACTGTGCTGTGGTGTGCCTCTTTCTGGACTCATCCTCACACAAAGTGTGCACTGCTTCCAATGTCAAGTCCAAGGAGCAACCTAGTTCGACCATCCAAGTCCATAATGGCAACATGGAAGACGTTTCAGCTCCAACCGGGCTGGCAAGGTCAGGAACATGCAGGGAGAACAATGAAGAGAACAACACCAATGAGGAGGAGGAGGAGGAGGAAGAGTGTAAGCAAGAGGAAATAGATCCTGAGTCAGAAATAGAGTGGTCTGCTCTTGAAGGAGTGTCTCGTGTGAACACATTGCTAAACCTCCCAAGGTTTGAACCTGACACAGAAGACAAGGGTATCAGAAATAAAAAATGA 1590 0.4635 MWVTFKIPTFRTGVVTDPSREESGCSSGVECILGILRALKMGSCFSAESRSPHPTSPSSSLRKRKNSSKKRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCYRQDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAQWELHVSGEEVLKEISVNTAAGMNLEEAVFASADEDSRVSVDAVETEKHPEIFQTLKESFLKAFKVMDRELKTHQSIDCFCSGTTAVTLIKQGHDLIVGNVGDSRAVLGTRDNDDSLVAVQLTVDLKPNLPAEEERIRKCRGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEMSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAATSRRSSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDSSSHKVCTASNVKSKEQPSSTIQVHNGNMEDVSAPTGLARSGTCRENNEENNTNEEEEEEEECKQEEIDPESEIEWSALEGVSRVNTLLNLPRFEPDTEDKGIRNKK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01169 529 ProSiteProfiles PPM-type phosphatase domain profile. 102 421 IPR001932 -
Spst1g01169 529 FunFam probable protein phosphatase 2C 33 97 424 - -
Spst1g01169 529 MobiDBLite consensus disorder prediction 473 493 - -
Spst1g01169 529 MobiDBLite consensus disorder prediction 47 72 - -
Spst1g01169 529 MobiDBLite consensus disorder prediction 449 493 - -
Spst1g01169 529 SUPERFAMILY PP2C-like 95 422 IPR036457 -
Spst1g01169 529 PANTHER PROTEIN PHOSPHATASE 68 419 IPR015655 GO:0004722|GO:0006470
Spst1g01169 529 CDD PP2Cc 101 421 IPR001932 -
Spst1g01169 529 Pfam Protein phosphatase 2C 214 400 IPR001932 -
Spst1g01169 529 Coils Coil 467 491 - -
Spst1g01169 529 Gene3D - 97 423 IPR036457 -
Spst1g01169 529 SMART PP2C_4 93 419 IPR001932 -
Spst1g01169 529 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01169 Spst-Chr1 14038259 14041654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01169 41 518 PP2C-type Phosphatase Gene Family AT3G02750 63.757 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01169 - - gmx:100790373 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01169 1 14038259 14041654 Spst1g01169 1 14038259 14041654 ECH