Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01163 ATGGGTGTCTCCACTGTCCGGGAGCTGAACCTCACCACCCTCACCCTCTTCATAATAATCTCCATTTCCAATCTAAATCTGATTCCTTTTCCTTTCAAAATGGAAGTGGACAATCTTAACAATCACAGCAACAATTGTGATGAAGAAACTTTTGTGTCAGACTCAAAAGGTGCAAAAAGAAGCATTGCAGAGAGGAGAGGGTTCAATTCAAATGCTGCAAGAATCAACACGGCAATGTTTCGAACTGCAACTTCAACAACCCCTTCTCCTTCCCCTGCTGCTCGATCACCTCGTCTCACCATCCCTCCTGGCATCAGCCCCACTGCATTGCTTGACTCTCCCGTCATGCTTCCAAATTCTCAGGCTGTGCCATCTCCCACCACTGGTAGTTTCTTCATGCTGCCACCTCTAGCTCAGGAAACTAATTCCTCGCTTCCTCCCTATTCTGCCCCTCTGAATCAGGTTTCTAGTAATTTCCACTCGGTTAAGGGAGGAAATAGAGAAAGCCAAGTTCAGTCACCATTAGATTTTTCATTCCCAGCAGATTTTTCAAAAGGCCATTCTGTGAAAAATAGTGAAGTAAATTCATACAATGATATGAAAATGCTAAATGATGCGATTGTTAATGCCAATAATGTTGAGATGCCAATGTCTGGCTCTGAAGAAGTAAGCGATGAAAGCACAATACCCAAAAATGCTATCAATAGTGAGGATATTGGAGGGCAACCTGCTTTAGAAGGAGAGCTGAAAGAAGCGTCTCATGCAACAGGAGTGGCAAGGACCTCAGAGGATGGTTATAATTGGAGGAAATATGGGCAAAAACAGGTCAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAACCTAATTGCCTGGTCAAGAAAAAGGTGGAACGATCCCATGATGGCCAAATTACAGAAATTATTTACAAGGGTACTCATAACCATGCAAAACCACACCCTAATCATAGAGGATCTGCACTTTCTACTGATGAGATTTCAGACATGGCTGAAGATCGTGCATTAGCTAAAGTGGATAGTGGGTTCATGTGGAGAAATATTCAGTCAGGACTCAAAGATTCAAAAAACAGTTTAGATTGGAAGGCTGATGGTCAGGAGAGGACATCATCAACTTCCGTTGTGACTGAGATTTCAGATCCTACATCAACTAACAAAGCTAAATCTCTATCTATGTTTGAATCGGAGGAGACTCCGGAGCTTTCTTCTACACTTCCTAGTCATGATATGGACGAAGATGCAGCCACTCAAGCACTTTTGTTGGTTGAAGATGACGCTGAGAATGATGAATCAGAACCTAAAAGAAGGAAGAAAGAGAGCTATGCAGCTGAATCAAATTTGCACCCTAGGTCTGTGCGTGAGCCAAGAGTGGTAGTTCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGATGTATGGTAAGGAAACATGTGGAAAGGGCCTCACACAATCTAAAATTTGTCCTTACTACTTATGAGGGAAAACACAATCATGAAGTGCCCACTGCAAGAACCAACAATCAGTTAAACTCAAGTGATGGTGGTTTACCTGCCAATGGTGCCAATGGGCAAGTGGCTCTTGCTTTACCAGGAAGTGCTGGCATTAAGTCTGAGACTCATCAAACCCTTGCACATCATTTTGATAGAAAACCTGAATTCTGCAATGAGTTTCTCAGGCCTAGTTTGGTTGGAAGTTTCAGCGGTGACATTAAGTTTGGTCCTCCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAATAACACCATGCCTTTTGGCTCCTATGCACTGAACCCAGATCGTTGTGTTGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCTGATTTTCCAATGACACTACCTTTGAATCTTCCCTCATCTGGGAAATTTTCAGTTTCTGGACTTAGTTTTAACCGTGCAAAACCAATAAACCATATCCAATCTTTCCTTTCTGGGCAGCAAGTGAAGAAGGACCTTGATACAGTATTCCTGAGGCCTAAGCAGGAACAGAAGGATGACACTATATATGGCTCGTGCATTCCCTCAATAGATGTCGCAAATGCTTCACTCACTTCTTCAGCAGCACCAACCATTTATCAACGTGTCATGCAAAATTTCCCTTCATAA 2232 0.4288 MGVSTVRELNLTTLTLFIIISISNLNLIPFPFKMEVDNLNNHSNNCDEETFVSDSKGAKRSIAERRGFNSNAARINTAMFRTATSTTPSPSPAARSPRLTIPPGISPTALLDSPVMLPNSQAVPSPTTGSFFMLPPLAQETNSSLPPYSAPLNQVSSNFHSVKGGNRESQVQSPLDFSFPADFSKGHSVKNSEVNSYNDMKMLNDAIVNANNVEMPMSGSEEVSDESTIPKNAINSEDIGGQPALEGELKEASHATGVARTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCLVKKKVERSHDGQITEIIYKGTHNHAKPHPNHRGSALSTDEISDMAEDRALAKVDSGFMWRNIQSGLKDSKNSLDWKADGQERTSSTSVVTEISDPTSTNKAKSLSMFESEETPELSSTLPSHDMDEDAATQALLLVEDDAENDESEPKRRKKESYAAESNLHPRSVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKFVLTTYEGKHNHEVPTARTNNQLNSSDGGLPANGANGQVALALPGSAGIKSETHQTLAHHFDRKPEFCNEFLRPSLVGSFSGDIKFGPPSLCQMKYPSLNNTMPFGSYALNPDRCVAPQAGSIASMFPDFPMTLPLNLPSSGKFSVSGLSFNRAKPINHIQSFLSGQQVKKDLDTVFLRPKQEQKDDTIYGSCIPSIDVANASLTSSAAPTIYQRVMQNFPS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01163 743 Gene3D WRKY domain 250 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 MobiDBLite consensus disorder prediction 217 235 - -
Spst1g01163 743 FunFam WRKY transcription factor 57 462 536 - -
Spst1g01163 743 MobiDBLite consensus disorder prediction 432 456 - -
Spst1g01163 743 MobiDBLite consensus disorder prediction 372 413 - -
Spst1g01163 743 SUPERFAMILY WRKY DNA-binding domain 260 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 SMART WRKY_cls 262 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 SMART WRKY_cls 476 535 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 111 556 IPR044810 GO:0003700
Spst1g01163 743 Pfam WRKY DNA -binding domain 477 534 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 Pfam WRKY DNA -binding domain 263 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 MobiDBLite consensus disorder prediction 217 241 - -
Spst1g01163 743 Gene3D WRKY domain 463 529 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 ProSiteProfiles WRKY domain profile. 471 536 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 ProSiteProfiles WRKY domain profile. 263 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01163 743 MobiDBLite consensus disorder prediction 363 417 - -
Spst1g01163 743 MobiDBLite consensus disorder prediction 436 456 - -
Spst1g01163 743 FunFam WRKY transcription factor 250 322 - -
Spst1g01163 743 SUPERFAMILY WRKY DNA-binding domain 469 536 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01163 Spst-Chr1 13963446 13967163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01163 34 539 WRKY Transcription Factor Family AT5G56270 41.111 4.53e-100 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst1g01163 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01163 K18835 - gmx:100800211 1137.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01163 1 13963446 13967163 Spst1g01163 1 13963446 13967163 ECH