Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01147 ATGTTCAAATTCCTCAAAGAGGTCGTTGGTGGATCTGGAACGGGCCTCAAGGATCTCCCATACAACATCGCCGAACCTTTCCCTTCCGCTTGGGGCTCCTGGACTCACTCTCGCGGCACCTCCAAGGACGACGGTTCTCTTGTCTCCGTCTTCTCTCTCTCGGGCTCCAATGCTCAGGATGGTCACTTAGCTGCTGCGCGCAACGGCGTCAAGCGTCTTCGAACTGTTAGGCATCCGAATATCTTGTCGTTTCTTCACAGCGCTGAGATTGAGACTTATGATGGAGGTTCGCCGAAGGTTACGATATATATTGTGACTGAACCAGTGATGCCGCTATCCGAGAAAATCAAGGAGTTAGGGCTTGAAGGTACACAAAGGGATGAATATTATGCTTTGGGTCTTCATCAAATTGCTAAAGCTGTGAGCTTCTTGAATAATGATTGTAAACTTGTTCATGGTAATGTTTGCTTGGCTAGTGTTGTTGTGACACCAACTTTGGACTGGAAGCTTCACGCTTTTGATGTTCTATCTGAGTTTGATGGGAGTAATGAAACGTCTTCTGGTCAAATGCTGCAATATGCATGGCTTGTTGCATCACAATACAAACCAATGGAGTTGGCGAAATCAGACTGGGATGCAATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGTTGCCTAATTTATGAGGTATTCTCTGGTCTGAGGTTGGGCAAGACAGAAGAATTACGCAACACTGGTTCCATTCCCAAGTCTCTGCTTCCAGATTACCAACGACTGTTGAGTTCCCTACCCTCTCGTAGATTAAACACATCAAAGCTTATAGAAAATAGTGGTGAGCGCTCCTTGATAGATTTATACTTAATCATATATGGAAATGGTTCACCTAACATTGTGGTTGTTTTGCCTCTTTCTTTGAGGGATTCATGTGTTTTGTGTTTTGAGTTTTTCAATAATGGATATGCAGAATACTTTCAAAATAAGCTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTAAAAGATAGTGTGGAGAGGGACACCTTCTTCCGCAAGCTTCCAAATTTAGCTGAGCAACTTCCTCGCCAAATAGTGTTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCTCAGCTTTGACTGCCCTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTTAACGTCAAGGTACTTCCTACAATAGTTAAACTCTTTGCCTCCAATGATCGAGCTATTCGAGTTGGCCTTCTCCAACATATTGATCAATATGGAGAGTCTTTATCAGCACAAGTTGTTGATGAGCAAGTTTACCCTCATGTTGCTACTGGGTTCTCTGACACATCTGCTTTTCTCAGAGAACTCACTCTGAAGTCTATGTTAATTCTAGCTCCCAAGTTGTCTCAAAGAACCATTTCAGGGTCATTATTGAAGTATCTGTCAAAGTTGCAGGTTGATGAAGAACCAGCAATTAGAACAAATACAACCATATTATTAGGCAATATTGGAAGTTACTTAAACGAAGGGACAAGAAAAAGAGTATTGATTAATGCATTTACAGTCCGTGCATTACGTGATACTTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGCGCAACCAGTTCCTATTATGACATCACTGAAGTTGCAACCCGGATTCTTCCTAATGTGGTTGTGCTCACAATTGATCCTGACAGTGATGTTAGAACTAAGGCATTTCAAGCGGTTGATCAGTTTTTGCAGATAGCCAAGCAACACTATGAAAAGACAAATGCAGCAGATACGATTGGTGGTGCAAGTGTGGTAGGCTCATCTGTTCCAGGAAATGCTAGTTTGCTTGGATGGGCTATGAGCTCTTTGACCTTGAAGGGTAAACCTTCTGATCATGCTCCAGTTGCTTCTGCAATTTCGTCTACAATTACAACATCTTCTAATGGAACCACAGGATTGGTCTTGCCTGAATCACCTGACTTTAGGGCAGCTTCCTTACATGAGTACTTTTTGACAAAATTTAACCATGTTCATTTAATTTTGTTGGGGGGAAATTCAGGCATAGAGACGCCATCTACAGCACCAGCCCGTATAAGCTCCACAACAGATTTCTCCGCAACAGATTTGGCGGAACACCCTGTCCCAACATCTCCTACATCAACGGATGGCTGGGGGGAACTTGAGAATGGAATTCAAGACGAGCATGAAAGTGACAGGGATGGGTGGGATGAACTGGAACCACTTGAAGAGACAAAGCCAGCTCCCGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACAAACAAAACAAGCATCAAATTGGCTGTCCAAAAGTACATCAAAATTGAACAAGGATGAGGATGATGATTTGTGGGGATCTATAGCAGCTCCTGCTCCGAAAACTGCAAGACCTTTGAAAACAGGTCAAACTGATGATGATGATCCTTGGGCTGCCATTGCTGCTCCGGCACCCACTACGAAGGCCAAGCCCTTATCCACTAGCAGAGGTAGGGTAACCAAACCTTCTGCTCCAAAATTAGGTGCTCAGCGGATAAACCGAACATCATCAGGCATGTAA 2631 0.4375 MFKFLKEVVGGSGTGLKDLPYNIAEPFPSAWGSWTHSRGTSKDDGSLVSVFSLSGSNAQDGHLAAARNGVKRLRTVRHPNILSFLHSAEIETYDGGSPKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNVCLASVVVTPTLDWKLHAFDVLSEFDGSNETSSGQMLQYAWLVASQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRLGKTEELRNTGSIPKSLLPDYQRLLSSLPSRRLNTSKLIENSGERSLIDLYLIIYGNGSPNIVVVLPLSLRDSCVLCFEFFNNGYAEYFQNKLVDTIHFMEILSLKDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKMGSWLSAEEFNVKVLPTIVKLFASNDRAIRVGLLQHIDQYGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLQIAKQHYEKTNAADTIGGASVVGSSVPGNASLLGWAMSSLTLKGKPSDHAPVASAISSTITTSSNGTTGLVLPESPDFRAASLHEYFLTKFNHVHLILLGGNSGIETPSTAPARISSTTDFSATDLAEHPVPTSPTSTDGWGELENGIQDEHESDRDGWDELEPLEETKPAPALANIQAAQRRPVSQPISQTKQASNWLSKSTSKLNKDEDDDLWGSIAAPAPKTARPLKTGQTDDDDPWAAIAAPAPTTKAKPLSTSRGRVTKPSAPKLGAQRINRTSSGM 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01147 876 Gene3D Transferase(Phosphotransferase) domain 1 110 280 - -
Spst1g01147 876 MobiDBLite consensus disorder prediction 774 797 - -
Spst1g01147 876 SUPERFAMILY Protein kinase-like (PK-like) 38 279 IPR011009 -
Spst1g01147 876 ProSiteProfiles Protein kinase domain profile. 2 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g01147 876 MobiDBLite consensus disorder prediction 773 876 - -
Spst1g01147 876 Gene3D - 326 605 IPR011989 -
Spst1g01147 876 MobiDBLite consensus disorder prediction 716 751 - -
Spst1g01147 876 MobiDBLite consensus disorder prediction 716 737 - -
Spst1g01147 876 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Spst1g01147 876 ProSiteProfiles HEAT repeat profile. 567 605 IPR021133 -
Spst1g01147 876 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 9 852 - -
Spst1g01147 876 SUPERFAMILY ARM repeat 337 598 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01147 Spst-Chr1 13820647 13831741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01147 70 280 MAP Kinase Kinase Kinase AT5G66850 24.664 3.79e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Spst1g01147 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01147 K08876 - gmx:100789813 1338.94