Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01139 ATGGCTACCCACGTTGCTCTTCTTCGTGCTCCTCCACTTTCAATCTCCACTCAACGCTTCCATGTCAAACAGATTTGCATAAATGGAATCAAATTCTCCACCACCACTTCTTCTTCTTCTTGCTTTCCATGCTCCATAACAACACAAAGAGGGTCTTTTTCCTCGGTGATTGCATCTTCCTCTTCAAATGGAAGAGACCCGGATTCGGTGGATGATGAAGAGGTACGAAAAGTGGAGCGCATTCTCGAAGAGAAACGACTAGCAGCATTGTCTGCTAGGATTGCCTCAGGGGAATTCACCGTGAAGCAGAAATCTGTTTTGCTTTCTATAATGGAGGGATTGGCAAAGGTGGGGGTGCCCAATGAAGTTCTGGATTTTTTGTTTGGTTGGGTTGAAGGGGGTGGTGTGTACCGCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTATTCGAAGTGTTGCCTTCTTCATTCCCTTGTATGAACTTTACCTCACATATGGGGGGATTTTTAGGTTGACGTTTGGACCAAAGTCCTTTCTGATAGTATCTGATCCGACTATTGCAAAACACATATTGAGAGACAATTCAAAGGCATATTCAAAGGGCATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGTCTCATCCCAGCTGATGGTGAAATATGGCGAGTTAGACGCCGTGCTATAGTCCCAGCATTCCACCAGAAGTATGTAGCAGCTATGATCGACCTTTTTGGACAAGCTGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCTGCATCCGATGGAGAAGATGCTGAGATGGAATCACTTTTCTCTCGATTAACCTTGGACATCATTGGAAAGGCAGTATTCAATTATGATTTTGATAGTTTATCGAATGACACTGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCAGTATGGGATATCCCAATATGGAAAGATGTATCACCACGTCTAAGGAAGGTTAATGCAGCTCTCAAATTGATCAATGATACGCTTGATGAACTGATAGCAATATGTAAGAGAATAGTGGATGAAGAAGACTTACAGTTTCATGAGGAGTACATGAATGAACAAGATCCAAGTATTCTACACTTCTTGTTAGCGTCAGGAGATGATGTATCAAGTAAGCAACTTCGTGATGACTTAATGACCATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCACGGAGCCTAGAGTCATGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGTGATAGATGTCCAACTATTGAAGACATGAAGAAACTCAAATATACGACCCGAGTGATCAATGAGTCATTAAGGCTTTACCCACAACCACCTGTGTTAATTCGTCGCTCTCTTGAGGATGATGTTCTTGGCGAGTACTCTATAAAGAGAGGTGAAGATATTTTTATATCTGTGTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGATGCTGACAAATTTGAACCTGAAAGATGGCCATTAGATGGACCAAACCCTAATGAGACGAATCAAAGCTTCAAATATCTTCCGTTTGGTGGAGGACCAAGGAAATGTGTAGGTGATTTGTTTGCTACATACGAGACTGTAGTAGCTCTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCGGTTGGAGCTCCACCTGTTGAGATGACTACTGGAGCTACAATTCACACGACACAAGGGCTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTGCCCTCATTACAGAGGTCAACATTGGAAGTGGATTCATCCATAAGCCTTTCTGAGCAGGATGAAATAAGTCAGAAAGGCCAAGTTTATCAGTCTCAGGCTCAGCCCTAA 1914 0.43 MATHVALLRAPPLSISTQRFHVKQICINGIKFSTTTSSSSCFPCSITTQRGSFSSVIASSSSNGRDPDSVDDEEVRKVERILEEKRLAALSARIASGEFTVKQKSVLLSIMEGLAKVGVPNEVLDFLFGWVEGGGVYRKIPEAKGSIKAIRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPTIAKHILRDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPAFHQKYVAAMIDLFGQAADRLCQKLDAAASDGEDAEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVAPIPVWDIPIWKDVSPRLRKVNAALKLINDTLDELIAICKRIVDEEDLQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSTEPRVMSKLQEEVDSVLGDRCPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEDDVLGEYSIKRGEDIFISVWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQSFKYLPFGGGPRKCVGDLFATYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQRSTLEVDSSISLSEQDEISQKGQVYQSQAQP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01139 637 PANTHER CYTOCHROME P450 FAMILY 4 159 596 - -
Spst1g01139 637 FunFam Carotene epsilon-monooxygenase, chloroplastic 141 598 - -
Spst1g01139 637 MobiDBLite consensus disorder prediction 616 637 - -
Spst1g01139 637 Gene3D Cytochrome P450 142 605 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS P450 superfamily signature 404 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS P450 superfamily signature 534 543 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS P450 superfamily signature 543 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 536 545 IPR017972 GO:0005506|GO:0016705
Spst1g01139 637 CDD CYP97 157 590 - -
Spst1g01139 637 Pfam Cytochrome P450 161 579 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 163 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 413 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 495 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 277 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 455 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 393 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 533 543 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 PRINTS E-class P450 group I signature 543 566 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g01139 637 SUPERFAMILY Cytochrome P450 154 596 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01139 Spst-Chr1 13762094 13767150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01139 64 625 Cytochrome P450 AT1G31800 77.876 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01139 K15747 - gmx:100780770 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01139 1 13762094 13767150 Spst1g01139 1 13762094 13767150 ECH