Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g01133 | ATGGAGCTTCTTCACAACATCAACATTCTCACCACAATTCTGCTCCTATGCATATTCCCTCACTCACTCAAGTGCCAACAAGAATACCTCAATGGCACTGTCTATGACTGTTCTGAGAGCCCTTCAGCACCAAAAGGGTACCTTTGCAATGGCCTTCAGAAGTCATGCTCTTCCTTCTTACTTTTCAGGTCCATACCTCCCTATGATAACCCTGTCAGAATTGCCTACCTTCTTGGATCCGAGGCATCTACCATTGCCTCAATCAACAAGATCACAAGAAATGACAAGATTGCTTCCAACAAGACAATCATCGTTCCTGTATTCTGTTCATGTTCAGGAAACATTTACCAGCATAACACTCCTTACACTGCCAGCAAAAATGACACCTATTATCAGTTGGTAAAAGAAACCTTTCAAGGCCTCACTACGTGTCAGGCAATGATGGGTCAGAATTACTATGCAGCTACCAACATTGCAATTGGTGCTGTGCTTACAGTTCCGTTGTTATGTGCTTGTCCAACTGAAAATCAGGCAGCAAGAGGGATCACCTCCTTGCTGGTTTACTTGGTGAACTATGGTGACACTATTAAGTCCGTAGGAAAGGCTTATGGTGTCGATGAACAAAGTATGCTTGAGGCCAATGAGTTGGCTGTGCCAGAAAGTGCAGAGAGCAGAATGAACCTCGTTACATTGACACCTCTTTTAGTTCCTTTACCAGGGAAGAACTGCAAAGAGAACCCAGATGAATTCTATTGTACATGTTACCAAGCACCAGATGGAAGCTCCAAGGGGCCCTTCTGTGATGAATCTGATGGTCAGAAATTCCCTGCCAACTTGGTAGCTGCTTTAGGAGTTGGTATTGGTGGAGGCTTTCTGTTTTTGTTTCTTTTTGGGTACAAATCATATCAATACATTCAGAAAAATAGAGAAAGTATCCGTAAGGAAAACCTTTTCAAGCAAAATGGTGGCTACTTGTTACAAGAGAAGCTCTCATCTTACGGAAATGGAGAAATGGCAAAGCTGTTTACAGCCAAGGAGCTAGAAAGAGCAACAGATAACTACAACAGAAGTAGGTTTCTCGGTCAGGGTGGCTATGGCACAGTGTACAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAGGTCCAAAGAAATTGAAAGGAACAAGATAGAGACTTTTGTGAATGAAGTTGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAGCTATTAGGTTGCTGTCTTGAGACAGAAACTCCTTTATTAGTCTATGAATTCATTCCCAATGGAACACTTTCTCACCATATCCACAGGAGAGACAATGAGGTCTCCCTTTCATGGGACAGTCGTCTTCGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATATATGCATTTTGCAGCTTCTATCCCCATCTTCCATAGAGACATCAAAACTACCAATATACTTTTAGACAGCAACTTCAGTGCCAAGGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGACAAGACTCACTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTAAGTTTTCAGATAAGAGTGATGTGTATAGTTTTGGGGTAGTGCTTGTAGAGCTCATAACTGGGAGAAAGCCTATTTCATTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCACAGTTCATTTCTCTGATGAAGGAGAACAAAGTTTATGAAATTTTAGATGGCAGGGTCGCTAAGAAAGCAAGGAAAGATGACATTCTTGCCATTGCAAACCTTTCTATGAGATGCTTGAGACTTAACGGGAAGAAAAGGCCAACAATGAAAGAGGTTTCATTAGAATTAGAAGCATTGAGAAAGGTACAAAGTTCCTTACAGATCAACCATGATCATGAGCACAAAACCAGTGATATCGATCAAGATTGCACAGAGGAAAGCATGTCGCTGTCCCTACAACTAGAATCCACATCATTTTAG | 2004 | 0.4187 | MELLHNINILTTILLLCIFPHSLKCQQEYLNGTVYDCSESPSAPKGYLCNGLQKSCSSFLLFRSIPPYDNPVRIAYLLGSEASTIASINKITRNDKIASNKTIIVPVFCSCSGNIYQHNTPYTASKNDTYYQLVKETFQGLTTCQAMMGQNYYAATNIAIGAVLTVPLLCACPTENQAARGITSLLVYLVNYGDTIKSVGKAYGVDEQSMLEANELAVPESAESRMNLVTLTPLLVPLPGKNCKENPDEFYCTCYQAPDGSSKGPFCDESDGQKFPANLVAALGVGIGGGFLFLFLFGYKSYQYIQKNRESIRKENLFKQNGGYLLQEKLSSYGNGEMAKLFTAKELERATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKRSKEIERNKIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEFIPNGTLSHHIHRRDNEVSLSWDSRLRIACEVAGAVAYMHFAASIPIFHRDIKTTNILLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSKFSDKSDVYSFGVVLVELITGRKPISFLEEDEGQNLIAQFISLMKENKVYEILDGRVAKKARKDDILAIANLSMRCLRLNGKKRPTMKEVSLELEALRKVQSSLQINHDHEHKTSDIDQDCTEESMSLSLQLESTSF | 667 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g01133 | 667 | Pfam | Protein tyrosine and serine/threonine kinase | 357 | 622 | IPR001245 | GO:0004672|GO:0006468 | |
Spst1g01133 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 624 | IPR011009 | - | |
Spst1g01133 | 667 | ProSitePatterns | Protein kinases ATP-binding region signature. | 360 | 382 | IPR017441 | GO:0005524 | |
Spst1g01133 | 667 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 475 | 487 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g01133 | 667 | FunFam | Wall-associated receptor kinase 2 | 430 | 647 | - | - | |
Spst1g01133 | 667 | SMART | serkin_6 | 354 | 627 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g01133 | 667 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 103 | 635 | IPR045274 | GO:0007166 | |
Spst1g01133 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 327 | 429 | - | - | |
Spst1g01133 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 430 | 653 | - | - | |
Spst1g01133 | 667 | ProSiteProfiles | Protein kinase domain profile. | 354 | 627 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g01133 | 667 | FunFam | Wall-associated receptor kinase 2 | 325 | 429 | - | - | |
Spst1g01133 | 667 | Pfam | LysM domain | 188 | 220 | IPR018392 | - | |
Spst1g01133 | 667 | CDD | STKc_IRAK | 360 | 627 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g01133 | Spst-Chr1 | 13720990 | 13723621 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g01133 | 284 | 628 | Receptor kinase-like Gene Family | AT1G16130 | 59.654 | 2.45e-145 | 439 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Spst1g01133 | PK_Tyr_Ser-Thr | 6.5e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g01133 | - | - | gmx:100795455 | 1137.87 |