Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01122 ATGGAAAGCCAAGACCCACCACCCCAGAACAACCCTTTTCTCTTCACGCCTAATTTGGAGCTGCAAAACCCTTTGGACCCTCAAGAGCAACTTTGTGACTTTGACTGGGCTAACATTTTCTCTGCCCAAAACAGCTTGTTATTGCATAATGGGGATACCAAGGAAACTATTGAATGTGTTTCTTCTTCATCTTCTTCTTTTATGGCTCAAAATAAGGTAGTTTGCGAGGAGGAAAAGGGAAACAAGGAGAAAAGGAAAGGTGGGAGGGTGAAGAAAACAACACGAGTGCCAAGGTTTGCGTTTCAAACAAGAAGTGCAGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGTCAGAAAGCTGTGAAGAATAGCACATATCCCAGAAGCTACTACCGGTGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTGTCCAAAGACACAAGCATTGTGGTGACAACTTATGAGGGAATTCACAACCACCCATGCGAGAAGCTGATGGAGACTCTGACCCCTCTTCTGAAGCAAATACAGTTTCTTGCTAGCTTGTAA 570 0.4386 MESQDPPPQNNPFLFTPNLELQNPLDPQEQLCDFDWANIFSAQNSLLLHNGDTKETIECVSSSSSSFMAQNKVVCEEEKGNKEKRKGGRVKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01122 189 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01122 189 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01122 189 FunFam WRKY transcription factor 57 96 170 - -
Spst1g01122 189 SUPERFAMILY WRKY DNA-binding domain 103 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01122 189 Gene3D WRKY domain 95 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst1g01122 189 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst1g01122 189 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 51 171 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01122 Spst-Chr1 13631565 13632282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01122 83 189 WRKY Transcription Factor Family AT5G41570 72.897 1.11e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst1g01122 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01122 - - gmx:100127398 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g01122 1 13631565 13632282 Spst4g01887 4 59497519 59500260 PCT