Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01116 ATGTCACGGATACTGCGATTGTTGCAAGTTTTCAAACCATATACGGTCGTATGCAGTGTGCACCGAATTTGTCAAGGCAAGAATGCAGTGACTGCTTGGATTGGAGCATCTCAGATATCCGAAGGTTTTCTAAAAACAAGGTTTGAAATTTACCCCTTCTACGACTCTACCACAGTATTAGATCCTGCACCGGTATCAGTTTCGCGGAAAACAGAGTCATTCATTGTTAAAAGAGTGAGAAGAAGGAAGGAAAAAAATCACGGCAACTCTTTGCGAACTGCCATCGTCATAGTTGTGCCAACTGTTCTCGTTGTTCTTGCTCTGCTGATTGTTATTAGCAGATACTTTAGAAGGATAGCAATGAAAAATCTTCTACCTGTGAAATCAGATGTCTTTAGTTTTGGTGTTCTAGTTCTTGAGATTGTTAGTGGCCAGAAGAACCACTATATTTGTAATGAGAAGAATGGGGAAGATGTATTAAACTTTGCATGGAGAAACTCGGTAGAGGGGACAGTTACAAGTTTTATAGATCTAACATTGAAGAATAATAGTTCACAAAATGAAATGATAAGATGCATCCACATTGATTTACTCTGTGTTGAGGAAACTTTGAATAACAGACCAACCATGGCTAATGTTGCACTCATGCTTAATACTTGTTCTATCACTCTCCCAGTGCCTAAAAAAAACCTGCATTTTTTATGGATAGTGCAACTGGAAGCCTTCCAAACATGTCATGGGAAAGTTAATTCATTGCAAACAAAGTCGACCCAATCCACTGCTAGATCAGCTCAGGAATCACTGAATGAGGCTTCAATCACTCAACTACACCCTCGCTAG 840 0.3952 MSRILRLLQVFKPYTVVCSVHRICQGKNAVTAWIGASQISEGFLKTRFEIYPFYDSTTVLDPAPVSVSRKTESFIVKRVRRRKEKNHGNSLRTAIVIVVPTVLVVLALLIVISRYFRRIAMKNLLPVKSDVFSFGVLVLEIVSGQKNHYICNEKNGEDVLNFAWRNSVEGTVTSFIDLTLKNNSSQNEMIRCIHIDLLCVEETLNNRPTMANVALMLNTCSITLPVPKKNLHFLWIVQLEAFQTCHGKVNSLQTKSTQSTARSAQESLNEASITQLHPR 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01116 279 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 120 279 - -
Spst1g01116 279 MobiDBLite consensus disorder prediction 256 279 - -
Spst1g01116 279 SUPERFAMILY Protein kinase-like (PK-like) 125 238 IPR011009 -
Spst1g01116 279 Gene3D Transferase(Phosphotransferase) domain 1 115 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g01116 Spst-Chr1 13553220 13555839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01116 120 279 Receptor kinase-like Gene Family AT4G05200 36.250 5.05e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst1g01116 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01116 - - pvu:PHAVU_008G058700g 198.364