Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01111 ATGGCCACCGCTCCTTCTCTTCTACACTCATCTGGGTCCTCATTTTTCGCTCAATTTCGTGCCTTTCCATATTTTTCTTCTTCTTCAGCGTTTCCTCATGGAAACAGACATGGGAATGCGGTGCTGACTGTGAGGGCCACTGATTCTGCGGTTGTGTTGGTGGAGAAGTCTGATGCAGAGAAGGCCAATAGGCTCAAAACTGCTTACACTGAAAAAATTGTGCCCTTGCTCATAGAAGAGTTCTCTTACACCAACAAGCACCAGGTGCCTAAAGTTGAGAAGATTGTGGTTAACTGTGGTATTGGAGACGCTGCACAAAATTCGAAGGGTTTGGACTCTGCAGTAAGTGATCTAGCAATGATCACAGGGCAGAGACCTATTAAGACTCGGGCTAGGGCTTCTCTTGCCACCTTTAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTAACACTAAGAGGAAATATTATGTACTCGTTCCTGGACCGAGTGATCAACTTGGGGCTTCCGAGGACAAGAGATTTCCAAGGTGTGAATCCCAATAGCTTTGATGGTCATGGGAATTACAGCATTGGCATTAAGGACCAGGGTGTGTTCCCAGAGATCAGAGCTGATGTGATTGGCAAGCCTAGGGGAATGGACATCTGCATAGCCACCACTGCTAATACAGATCAAGAAGCTCAAAGATTATTGGCGCTTATGGGTATGCCCTTCAGAGAGGGAAGTGGTTCTGCCGCAGCTGCTCGGAAAAAGAAGCTCAAGTCTCACCATTTTGATTCAAAAAGGGGAGGAAGAGGAAGGAAGTGA 807 0.4709 MATAPSLLHSSGSSFFAQFRAFPYFSSSSAFPHGNRHGNAVLTVRATDSAVVLVEKSDAEKANRLKTAYTEKIVPLLIEEFSYTNKHQVPKVEKIVVNCGIGDAAQNSKGLDSAVSDLAMITGQRPIKTRARASLATFKIREGQPLGIAVTLRGNIMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVIGKPRGMDICIATTANTDQEAQRLLALMGMPFREGSGSAAAARKKKLKSHHFDSKRGGRGRK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01111 268 MobiDBLite consensus disorder prediction 242 268 - -
Spst1g01111 268 Pfam Ribosomal protein L5 85 141 IPR031310 -
Spst1g01111 268 FunFam 50S ribosomal protein L5 61 240 - -
Spst1g01111 268 SUPERFAMILY RL5-like 64 239 IPR022803 -
Spst1g01111 268 Gene3D - 56 240 IPR022803 -
Spst1g01111 268 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Spst1g01111 268 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Spst1g01111 268 MobiDBLite consensus disorder prediction 249 268 - -
Spst1g01111 268 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Spst1g01111 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 66 248 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01111 91 195 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 27.619 4.52e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01111 K02931 - gmx:100818896 456.062