Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g01086 | ATGAGACTGAGTTTCTTAGAAATCCTAGAGCACAACGATGGAGCACACTACAATGACATAGTGTTCTGCTTTCCTCTTAGAGCCATTGTTATCTCTGTTGGATTGCTAGCATGCCACAAGACTCTTTATGTTCTCTGTCACTTTTCTTTTCTTGAGTTCAATCTAGCAATGATAGTGATGGATTTCATAAGTCCAGTGTTGGAGATCATAATTCGCTTGTGGGACTGTTGTGCCTTCGTCCGTGACTATGAAGAGAACCTTTCTTGTTTGAGGGACGTGGCATCTGACCTCCAAGCCCTTTGGGTTGATGTGAGTGTGAAGGTCCAACTGGCTGAGGCACGGCACCAGAGACGTCTGAATGAAGTGAATGATTGGTTGGAGAAAGTTGAAGCCATGCAAAGAGAAGTTCAAGCTATTCAAGAGAAAGTTGCTCATGTTCAAGAAACACGTAGCAGATGTTCGGGAAATTTTCCAACAAGCTGCAGGATGGGAAGGATTGTAACTCGAAAAATAGGTGAGGTTGGTCAACTTATTGATAAAGGACATTTTGATGTAGTGGCTCAGGAAATGCCACATGCTTTGGTAGATGAAATCCCTCTAGAGGTCACAATAGGTCTAGAATCAACTTTTGATGAACTTGGTGCATGTTTTGATGATAATCATGTGGGAGTTATTGGCTTGTTTGGCATGGGGGGTGTAGGAAAGACAACCCTGCTCAAAAAGTTCAACAATGAGTTCCTTCCCACCAAATTTTATGATGTAGTTATTTGGGTTGTGGTGTCTAAAGAAGCAGATGTAGGGAGTGTTCAACAAAGCATAGGGAACAAATTAAATGTTCCTGTTGGTAAATGGGATGGTAAGACCATTGATGAGAGAGCTATTGTTTTATACAACTTTTTGAAAAGGAAGAAGTTTGTGTTACTGCTTGATGATTTATGGGAGCGTATAAATCTTCTGAAGTTGGGGATTCCTCTTCCTGATATGGAAAACGGATCTAAAGTGATATTCACTACAAGGTCCATGGAGGTTTGCAGGAACATGGAAGCCAACAGATGCATCAAAGTAGAATGTTTAGCACCAAAGGAAGCATTTGAATTGTTCAGAGAGAAAGTGGGTGAAGAAACTCTCAACTCTCATCCTGAAATATTTCATCTGGCTCAAATTGTGGCCAAGGAGTGTGAGGGACTTCCACTGGCTCTTATCACTGTTGGAAGATCTATGGCTCGAAAGACTCTCCCTGAATGGAAACGAGCAGCACGGACTTTAAAGATTTATCCATCAAGATTTTCAGGTATGGTTGACTATGTCTATTGTTTGCTTGAGTTTAGCTATGACAGTTTGCCAAGTGCTATACACAAGTCTTGTTTCTTGTACTGTTCCATCTTCCCTGAAGACTACGACATTAGAAAAGATGAACTCATTCAACTGTGGATTGGGCAAGGTCTTTTAGCTGAATTTGGTGATGATGTCTATGAAGCGCGTAACCAAGGAGAAGAAATCATAGCAAGCTTGAAGTTTGCTTGTTTGTTGGAGGACAGTGAGAGACAAAATAGGATTAAGATGCATGATGTGATCAGAGATATGGCTTTGTGGCTAGCTTGTGATCAAGGATCCAACACCAGGTTTTTGGTGAAAGACAGCAGTTCTATTGAAGCATATAATCCTGCAAAGTGGAAAGAAGTAGAGATAGTATCACTGTGGCGACATAGCATTCAAAACCTCTCAGGAAAACCAGATTGCTCAAGTCTATTGACTATGCTTGTTAGAAACACCGAGCTAACCAACTTTCCTGATGAGATCTTTCTGACTGCAAACCATCTTAGAGTGTTAGACATATCAGGTAATAAAAGAGTAAAAAAATTACCTTCAAGTATTGGGAAGTTAGTTAATTTGCAGCATTTGGATCTATCAGGTACTGATATACAGGAATTGCCAAGGGAGCTCCAGAACTTGAAAAAACTGAGGTGCCTGCTGCTAAATTATATTTGTAATAGGCTTGTCTTCCCAAGGAGTTTGATATCAAGTTTGTTGTCATTGCAAGTGTTTAGCAAATTACCATGGGAAGATCAATTTATTCTTCCCGACTTGGGGGAACCCGAGGAAACTGTCTTGTTGCAAGAACTGGAATGCTTGGAATGCCTTCAAGACGTAAGCATTGCTCTATTTTGCTTTTCTTCTATGCAAGTATTACTGAATTCTCCGAAATTGCAAAGATGCATTAGACATCTGAGAGTAATTTCTCCTTTCAATTCAATGCCACATGTTGTATTATTCTCATTATTGAGAAATATGCAGCATCTAGAGGTGTTGTCAATGTCAATTTCTTCATCTCCAAGGTTAGACCATGTCAGGAAAAAGGAGTCTCCATCACAGGGTTCTATGATTGAGTTCATTCCCATGAGTTCTAAACTTACTGAGCATGGTTACATCGTTGCCCTTCGGGAGTTATCTCTTGAAGGGTGTGGCATGTCCAACTTGAATTGGCTCACTCTTGCTCCAAGCCTTCAACTCCTTAAAATATACAATTGTTCCTACTTGGAAGAAGTCATAGGTGAAGAATTTGAACATGCAGAAAATGTTTTTTCAAGTCTTGAAATTGTTGATCTAGATTCTCTACCAAAATTAAGGAGCATATGCTCAAAAGTATTACAATTTCCTTGTCTTAAGGAGATCTGTGTAGCAGATTGTCCGCGGCTGATAAAACTCCCTTTTGATTCCAACAGTGCAAAGAACAGTCTGGAGCACATTAATGGACAGAAAAAGTGGTGGCGTAAACTGCAGTGGGAAGATGAAGCCACAAGGGATCACTTTGGTTCAAAATATGTGCCTTTACGTAAAATTCGCCAAATACATTGA | 2856 | 0.4016 | MRLSFLEILEHNDGAHYNDIVFCFPLRAIVISVGLLACHKTLYVLCHFSFLEFNLAMIVMDFISPVLEIIIRLWDCCAFVRDYEENLSCLRDVASDLQALWVDVSVKVQLAEARHQRRLNEVNDWLEKVEAMQREVQAIQEKVAHVQETRSRCSGNFPTSCRMGRIVTRKIGEVGQLIDKGHFDVVAQEMPHALVDEIPLEVTIGLESTFDELGACFDDNHVGVIGLFGMGGVGKTTLLKKFNNEFLPTKFYDVVIWVVVSKEADVGSVQQSIGNKLNVPVGKWDGKTIDERAIVLYNFLKRKKFVLLLDDLWERINLLKLGIPLPDMENGSKVIFTTRSMEVCRNMEANRCIKVECLAPKEAFELFREKVGEETLNSHPEIFHLAQIVAKECEGLPLALITVGRSMARKTLPEWKRAARTLKIYPSRFSGMVDYVYCLLEFSYDSLPSAIHKSCFLYCSIFPEDYDIRKDELIQLWIGQGLLAEFGDDVYEARNQGEEIIASLKFACLLEDSERQNRIKMHDVIRDMALWLACDQGSNTRFLVKDSSSIEAYNPAKWKEVEIVSLWRHSIQNLSGKPDCSSLLTMLVRNTELTNFPDEIFLTANHLRVLDISGNKRVKKLPSSIGKLVNLQHLDLSGTDIQELPRELQNLKKLRCLLLNYICNRLVFPRSLISSLLSLQVFSKLPWEDQFILPDLGEPEETVLLQELECLECLQDVSIALFCFSSMQVLLNSPKLQRCIRHLRVISPFNSMPHVVLFSLLRNMQHLEVLSMSISSSPRLDHVRKKESPSQGSMIEFIPMSSKLTEHGYIVALRELSLEGCGMSNLNWLTLAPSLQLLKIYNCSYLEEVIGEEFEHAENVFSSLEIVDLDSLPKLRSICSKVLQFPCLKEICVADCPRLIKLPFDSNSAKNSLEHINGQKKWWRKLQWEDEATRDHFGSKYVPLRKIRQIH | 951 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g01086 | 951 | ProSiteProfiles | Leucine-rich repeat profile. | 630 | 652 | IPR001611 | GO:0005515 | |
Spst1g01086 | 951 | Coils | Coil | 80 | 100 | - | - | |
Spst1g01086 | 951 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 198 | 459 | IPR027417 | - | |
Spst1g01086 | 951 | Gene3D | Ribonuclease Inhibitor | 545 | 925 | IPR032675 | - | |
Spst1g01086 | 951 | SUPERFAMILY | L domain-like | 520 | 915 | - | - | |
Spst1g01086 | 951 | FunFam | Probable disease resistance protein At1g61300 | 186 | 351 | - | - | |
Spst1g01086 | 951 | FunFam | Probable disease resistance protein At1g63360 | 444 | 531 | - | - | |
Spst1g01086 | 951 | Pfam | NB-ARC domain | 220 | 445 | IPR002182 | GO:0043531 | |
Spst1g01086 | 951 | Coils | Coil | 122 | 149 | - | - | |
Spst1g01086 | 951 | FunFam | Probable disease resistance protein At5g66910 | 357 | 443 | - | - | |
Spst1g01086 | 951 | PRINTS | Disease resistance protein signature | 299 | 313 | - | - | |
Spst1g01086 | 951 | PRINTS | Disease resistance protein signature | 224 | 239 | - | - | |
Spst1g01086 | 951 | PRINTS | Disease resistance protein signature | 602 | 618 | - | - | |
Spst1g01086 | 951 | PRINTS | Disease resistance protein signature | 393 | 407 | - | - | |
Spst1g01086 | 951 | PANTHER | NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED | 102 | 915 | - | - | |
Spst1g01086 | 951 | Gene3D | - | 358 | 443 | IPR042197 | - | |
Spst1g01086 | 951 | Gene3D | - | 187 | 357 | IPR027417 | - | |
Spst1g01086 | 951 | Pfam | Leucine rich repeat | 585 | 641 | IPR001611 | GO:0005515 | |
Spst1g01086 | 951 | Gene3D | - | 444 | 530 | IPR036388 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g01086 | Spst-Chr1 | 13284962 | 13288093 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g01086 | 225 | 529 | WRKY Transcription Factor Family | AT5G45050 | 25.714 | 2.01e-08 | 56.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g01086 | - | K13459 | vra:106758404 | 1575.07 |