Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g01086 ATGAGACTGAGTTTCTTAGAAATCCTAGAGCACAACGATGGAGCACACTACAATGACATAGTGTTCTGCTTTCCTCTTAGAGCCATTGTTATCTCTGTTGGATTGCTAGCATGCCACAAGACTCTTTATGTTCTCTGTCACTTTTCTTTTCTTGAGTTCAATCTAGCAATGATAGTGATGGATTTCATAAGTCCAGTGTTGGAGATCATAATTCGCTTGTGGGACTGTTGTGCCTTCGTCCGTGACTATGAAGAGAACCTTTCTTGTTTGAGGGACGTGGCATCTGACCTCCAAGCCCTTTGGGTTGATGTGAGTGTGAAGGTCCAACTGGCTGAGGCACGGCACCAGAGACGTCTGAATGAAGTGAATGATTGGTTGGAGAAAGTTGAAGCCATGCAAAGAGAAGTTCAAGCTATTCAAGAGAAAGTTGCTCATGTTCAAGAAACACGTAGCAGATGTTCGGGAAATTTTCCAACAAGCTGCAGGATGGGAAGGATTGTAACTCGAAAAATAGGTGAGGTTGGTCAACTTATTGATAAAGGACATTTTGATGTAGTGGCTCAGGAAATGCCACATGCTTTGGTAGATGAAATCCCTCTAGAGGTCACAATAGGTCTAGAATCAACTTTTGATGAACTTGGTGCATGTTTTGATGATAATCATGTGGGAGTTATTGGCTTGTTTGGCATGGGGGGTGTAGGAAAGACAACCCTGCTCAAAAAGTTCAACAATGAGTTCCTTCCCACCAAATTTTATGATGTAGTTATTTGGGTTGTGGTGTCTAAAGAAGCAGATGTAGGGAGTGTTCAACAAAGCATAGGGAACAAATTAAATGTTCCTGTTGGTAAATGGGATGGTAAGACCATTGATGAGAGAGCTATTGTTTTATACAACTTTTTGAAAAGGAAGAAGTTTGTGTTACTGCTTGATGATTTATGGGAGCGTATAAATCTTCTGAAGTTGGGGATTCCTCTTCCTGATATGGAAAACGGATCTAAAGTGATATTCACTACAAGGTCCATGGAGGTTTGCAGGAACATGGAAGCCAACAGATGCATCAAAGTAGAATGTTTAGCACCAAAGGAAGCATTTGAATTGTTCAGAGAGAAAGTGGGTGAAGAAACTCTCAACTCTCATCCTGAAATATTTCATCTGGCTCAAATTGTGGCCAAGGAGTGTGAGGGACTTCCACTGGCTCTTATCACTGTTGGAAGATCTATGGCTCGAAAGACTCTCCCTGAATGGAAACGAGCAGCACGGACTTTAAAGATTTATCCATCAAGATTTTCAGGTATGGTTGACTATGTCTATTGTTTGCTTGAGTTTAGCTATGACAGTTTGCCAAGTGCTATACACAAGTCTTGTTTCTTGTACTGTTCCATCTTCCCTGAAGACTACGACATTAGAAAAGATGAACTCATTCAACTGTGGATTGGGCAAGGTCTTTTAGCTGAATTTGGTGATGATGTCTATGAAGCGCGTAACCAAGGAGAAGAAATCATAGCAAGCTTGAAGTTTGCTTGTTTGTTGGAGGACAGTGAGAGACAAAATAGGATTAAGATGCATGATGTGATCAGAGATATGGCTTTGTGGCTAGCTTGTGATCAAGGATCCAACACCAGGTTTTTGGTGAAAGACAGCAGTTCTATTGAAGCATATAATCCTGCAAAGTGGAAAGAAGTAGAGATAGTATCACTGTGGCGACATAGCATTCAAAACCTCTCAGGAAAACCAGATTGCTCAAGTCTATTGACTATGCTTGTTAGAAACACCGAGCTAACCAACTTTCCTGATGAGATCTTTCTGACTGCAAACCATCTTAGAGTGTTAGACATATCAGGTAATAAAAGAGTAAAAAAATTACCTTCAAGTATTGGGAAGTTAGTTAATTTGCAGCATTTGGATCTATCAGGTACTGATATACAGGAATTGCCAAGGGAGCTCCAGAACTTGAAAAAACTGAGGTGCCTGCTGCTAAATTATATTTGTAATAGGCTTGTCTTCCCAAGGAGTTTGATATCAAGTTTGTTGTCATTGCAAGTGTTTAGCAAATTACCATGGGAAGATCAATTTATTCTTCCCGACTTGGGGGAACCCGAGGAAACTGTCTTGTTGCAAGAACTGGAATGCTTGGAATGCCTTCAAGACGTAAGCATTGCTCTATTTTGCTTTTCTTCTATGCAAGTATTACTGAATTCTCCGAAATTGCAAAGATGCATTAGACATCTGAGAGTAATTTCTCCTTTCAATTCAATGCCACATGTTGTATTATTCTCATTATTGAGAAATATGCAGCATCTAGAGGTGTTGTCAATGTCAATTTCTTCATCTCCAAGGTTAGACCATGTCAGGAAAAAGGAGTCTCCATCACAGGGTTCTATGATTGAGTTCATTCCCATGAGTTCTAAACTTACTGAGCATGGTTACATCGTTGCCCTTCGGGAGTTATCTCTTGAAGGGTGTGGCATGTCCAACTTGAATTGGCTCACTCTTGCTCCAAGCCTTCAACTCCTTAAAATATACAATTGTTCCTACTTGGAAGAAGTCATAGGTGAAGAATTTGAACATGCAGAAAATGTTTTTTCAAGTCTTGAAATTGTTGATCTAGATTCTCTACCAAAATTAAGGAGCATATGCTCAAAAGTATTACAATTTCCTTGTCTTAAGGAGATCTGTGTAGCAGATTGTCCGCGGCTGATAAAACTCCCTTTTGATTCCAACAGTGCAAAGAACAGTCTGGAGCACATTAATGGACAGAAAAAGTGGTGGCGTAAACTGCAGTGGGAAGATGAAGCCACAAGGGATCACTTTGGTTCAAAATATGTGCCTTTACGTAAAATTCGCCAAATACATTGA 2856 0.4016 MRLSFLEILEHNDGAHYNDIVFCFPLRAIVISVGLLACHKTLYVLCHFSFLEFNLAMIVMDFISPVLEIIIRLWDCCAFVRDYEENLSCLRDVASDLQALWVDVSVKVQLAEARHQRRLNEVNDWLEKVEAMQREVQAIQEKVAHVQETRSRCSGNFPTSCRMGRIVTRKIGEVGQLIDKGHFDVVAQEMPHALVDEIPLEVTIGLESTFDELGACFDDNHVGVIGLFGMGGVGKTTLLKKFNNEFLPTKFYDVVIWVVVSKEADVGSVQQSIGNKLNVPVGKWDGKTIDERAIVLYNFLKRKKFVLLLDDLWERINLLKLGIPLPDMENGSKVIFTTRSMEVCRNMEANRCIKVECLAPKEAFELFREKVGEETLNSHPEIFHLAQIVAKECEGLPLALITVGRSMARKTLPEWKRAARTLKIYPSRFSGMVDYVYCLLEFSYDSLPSAIHKSCFLYCSIFPEDYDIRKDELIQLWIGQGLLAEFGDDVYEARNQGEEIIASLKFACLLEDSERQNRIKMHDVIRDMALWLACDQGSNTRFLVKDSSSIEAYNPAKWKEVEIVSLWRHSIQNLSGKPDCSSLLTMLVRNTELTNFPDEIFLTANHLRVLDISGNKRVKKLPSSIGKLVNLQHLDLSGTDIQELPRELQNLKKLRCLLLNYICNRLVFPRSLISSLLSLQVFSKLPWEDQFILPDLGEPEETVLLQELECLECLQDVSIALFCFSSMQVLLNSPKLQRCIRHLRVISPFNSMPHVVLFSLLRNMQHLEVLSMSISSSPRLDHVRKKESPSQGSMIEFIPMSSKLTEHGYIVALRELSLEGCGMSNLNWLTLAPSLQLLKIYNCSYLEEVIGEEFEHAENVFSSLEIVDLDSLPKLRSICSKVLQFPCLKEICVADCPRLIKLPFDSNSAKNSLEHINGQKKWWRKLQWEDEATRDHFGSKYVPLRKIRQIH 951
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst1g01086 951 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Spst1g01086 951 Coils Coil 80 100 - -
Spst1g01086 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 459 IPR027417 -
Spst1g01086 951 Gene3D Ribonuclease Inhibitor 545 925 IPR032675 -
Spst1g01086 951 SUPERFAMILY L domain-like 520 915 - -
Spst1g01086 951 FunFam Probable disease resistance protein At1g61300 186 351 - -
Spst1g01086 951 FunFam Probable disease resistance protein At1g63360 444 531 - -
Spst1g01086 951 Pfam NB-ARC domain 220 445 IPR002182 GO:0043531
Spst1g01086 951 Coils Coil 122 149 - -
Spst1g01086 951 FunFam Probable disease resistance protein At5g66910 357 443 - -
Spst1g01086 951 PRINTS Disease resistance protein signature 299 313 - -
Spst1g01086 951 PRINTS Disease resistance protein signature 224 239 - -
Spst1g01086 951 PRINTS Disease resistance protein signature 602 618 - -
Spst1g01086 951 PRINTS Disease resistance protein signature 393 407 - -
Spst1g01086 951 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 102 915 - -
Spst1g01086 951 Gene3D - 358 443 IPR042197 -
Spst1g01086 951 Gene3D - 187 357 IPR027417 -
Spst1g01086 951 Pfam Leucine rich repeat 585 641 IPR001611 GO:0005515
Spst1g01086 951 Gene3D - 444 530 IPR036388 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst1g01086 Spst-Chr1 13284962 13288093 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g01086 225 529 WRKY Transcription Factor Family AT5G45050 25.714 2.01e-08 56.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g01086 - K13459 vra:106758404 1575.07